RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA825466", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 7 ✖

tax_phylum 1

  • Negarnaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA825466 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
820405 820405 PRJNA825466_P_NODE_14061_length_263_cov_2.010526_g13960_i0 PRJNA825466 14061 263 2.010526 5.28768338 Orthorubulavirus mammalis 3052558 Viruses Viruses 453 5.63e-123   NTclustered gi|1841764908|gb|MT124463.1| 2905673 g13960 i0 98.077 62.5893536121673 260 5 99 0 4 263 15246 14987 Parainfluenza virus 5 isolate China/HB01/2019, complete genome blastn 16461 453 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
2503673 2503673 PRJNA825466_P_NODE_642_length_836_cov_2.011796_g561_i0 PRJNA825466 642 836 2.011796 16.81861456 Paramyxoviridae 11158 Viruses Viruses 1511 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g561 i0 99.637 68.2571770334928 827 3 99 0 6 832 2872 2046 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 57063 1511 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
5056210 5056210 PRJNA825466_P_NODE_764_length_763_cov_1.681159_g679_i0 PRJNA825466 764 763 1.681159 12.82724317 Orthorubulavirus 2560195 Viruses Viruses 1384 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g679 i0 99.604 82.0275229357798 758 3 99 0 6 763 31 788 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 62587 1384 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
17805660 17805660 PRJNA825466_P_NODE_1114_length_650_cov_4.951473_g1018_i0 PRJNA825466 1114 650 4.951473 32.1845745 Orthorubulavirus 2560195 Viruses Viruses 1118 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1018 i0 97.846 84.4769230769231 650 8 99 5 4 650 5805 6451 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 54910 1118 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
19079792 19079792 PRJNA825466_P_NODE_955_length_697_cov_2.304487_g863_i0 PRJNA825466 955 697 2.304487 16.06227439 Orthorubulavirus 2560195 Viruses Viruses 1256 0   NTclustered gi|146351838|gb|EF543648.1| 149595 g863 i0 99.281 70.2338593974175 695 5 99 0 3 697 1596 902 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 48953 1256 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
24179794 24179794 PRJNA825466_P_NODE_5719_length_338_cov_13.422642_g5618_i0 PRJNA825466 5719 338 13.422642 45.36852996 Orthorubulavirus 2560195 Viruses Viruses 577 4.259999999999999e-160   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g5618 i0 98.765 77.6242603550296 324 4 96 0 5 328 2112 1789 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 26237 577 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
32677958 32677958 PRJNA825466_P_NODE_3460_length_402_cov_1.537994_g3359_i0 PRJNA825466 3460 402 1.537994 6.18273588 Chuvivirus 2842604 Viruses Viruses 175 2.64e-49   NR UVF58769.1 2842604 g3359 i0 59 1 134 55 100 0 1 402 284 417 UVF58769.1 MAG: S protein [Salarius guttatus piscichuvirus] diamond 402 175 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;