RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA825466" and tax_phylum = "Blastocladiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA825466 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28254509 28254509 PRJNA825466_P_NODE_17886_length_250_cov_0.870056_g17785_i0 PRJNA825466 17886 250 0.870056 2.17514 Coelomomyces lativittatus 945690 Fungi Fungi 134 1.29e-34   NR KAJ1502111.1 945690 g17785 i0 79.3 6.888 82 17 98.4 0 2 247 163 244 KAJ1502111.1 centromere/microtubule-binding protein cbf5 [Coelomomyces lativittatus] diamond 1722 134 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
30686215 30686215 PRJNA825466_P_NODE_14053_length_263_cov_2.284211_g13952_i0 PRJNA825466 14053 263 2.284211 6.00747493 Catenaria anguillulae PL171 765915 Fungi Fungi 66.2 4.9e-12   NR ORZ34686.1 765915 g13952 i0 49.3 3.44486692015209 73 36 82.1 1 15 230 11 83 ORZ34686.1 40S ribosomal protein S27, partial [Catenaria anguillulae PL171] diamond 906 66.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;