RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA825466" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA825466 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2095980 2095980 PRJNA825466_P_NODE_25962_length_243_cov_0.905882_g25861_i0 PRJNA825466 25962 243 0.905882 2.20129326 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 202 2.0599999999999995e-47   NTclustered gi|469926873|gb|CP003538.1| 349215 g25861 i0 84.39 66.3251028806584 205 32 84 0 2 206 1545825 1545621 Micavibrio aeruginosavorus EPB, complete genome blastn 16117 202 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
27402212 27402212 PRJNA825466_P_NODE_22503_length_246_cov_0.890173_g22402_i0 PRJNA825466 22503 246 0.890173 2.18982558 Bacteriovorax sp. 2608087 Bacteria Bacteria 140 1.21e-36   NR MFA6239134.1 2608087 g22402 i0 85.2 0.98780487804878 81 12 98.8 0 244 2 729 809 MFA6239134.1 CusA/CzcA family heavy metal efflux RND transporter [Bacteriovorax sp.] diamond 243 140 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;