RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA825466", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA825466 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28633728 28633728 PRJNA825466_P_NODE_23267_length_245_cov_1.767442_g23166_i0 PRJNA825466 23267 245 1.767442 4.3302329 Rotaria sp. Silwood1 2762511 Rotifera other_Eukaryota 54.7 2.36e-6   NR CAF4650720.1 2762511 g23166 i0 35.5 1.86122448979592 76 46 93.1 1 5 232 95 167 CAF4650720.1 unnamed protein product [Rotaria sp. Silwood1] diamond 456 54.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood1
28759750 28759750 PRJNA825466_P_NODE_29627_length_231_cov_3.113924_g29526_i0 PRJNA825466 29627 231 3.113924 7.19316444 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 56.6 4.94e-8   NR CAF0998078.1 392030 g29526 i0 50 1.94805194805195 50 20 62.3 2 16 159 23 69 CAF0998078.1 unnamed protein product [Rotaria magnacalcarata] diamond 450 56.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
30284680 30284680 PRJNA825466_P_NODE_22492_length_246_cov_0.890173_g22391_i0 PRJNA825466 22492 246 0.890173 2.18982558 Eurotatoria 2816136 Rotifera other_Eukaryota 70.9 4.88e-12   NR CAF3890895.1 392030 g22391 i0 40.3 6.18292682926829 72 43 87.8 0 216 1 345 416 CAF3890895.1 unnamed protein product [Rotaria magnacalcarata] diamond 1521 71.2 0.995786516853933 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
31729511 31729511 PRJNA825466_P_NODE_18817_length_249_cov_0.875000_g18716_i0 PRJNA825466 18817 249 0.875 2.17875 Adineta steineri 433720 Rotifera other_Eukaryota 75.1 1.65e-13   NR CAF1340047.1 433720 g18716 i0 42.5 2.8433734939759 80 41 96.4 1 2 241 1314 1388 CAF1340047.1 unnamed protein product [Adineta steineri] diamond 708 75.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;