RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA825466", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA825466 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27220879 27220879 PRJNA825466_P_NODE_16142_length_251_cov_1.786517_g16041_i0 PRJNA825466 16142 251 1.786517 4.48415767 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99.8 1.82e-22   NR KAI6647601.1 111878 g16041 i0 57.3 3.50199203187251 75 32 89.6 0 9 233 152 226 KAI6647601.1 AP-1 complex subunit mu-1 isoform X2 [Oopsacas minuta] diamond 879 100 0.998 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Oopsacas Oopsacas minuta
28294796 28294796 PRJNA825466_P_NODE_14906_length_258_cov_1.983784_g14805_i0 PRJNA825466 14906 258 1.983784 5.11816272 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 79 4.39e-15   NR XP_062501310.1 121492 g14805 i0 55.2 10.593023255814 58 25 66.3 1 173 3 175 232 XP_062501310.1 uncharacterized protein LOC134178448 [Corticium candelabrum] diamond 2733 79.3 0.996216897856242 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
28538990 28538990 PRJNA825466_P_NODE_10567_length_284_cov_1.369668_g10466_i0 PRJNA825466 10567 284 1.369668 3.88985712 Oscarella lobularis 121494 Porifera other_Eukaryota 145 2.41e-38   NR XP_065826338.1 121494 g10466 i0 62.8 2.97887323943662 94 34 99.3 1 283 2 163 255 XP_065826338.1 alpha-glucosidase 2-like isoform X2 [Oscarella lobularis] diamond 846 145 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;