RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA825466", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA825466 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19946984 19946984 PRJNA825466_P_NODE_22016_length_246_cov_2.364162_g21915_i0 PRJNA825466 22016 246 2.364162 5.81583852 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 174 4.55e-39   NTclustered gi|2037989810|ref|XM_041607735.1| 7654 g21915 i0 80.519 91.8780487804878 231 41 93 3 2 230 400 172 PREDICTED: Lytechinus variegatus tubulin alpha-1D chain (LOC121414526), mRNA blastn 22602 174 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32236148 32236148 PRJNA825466_P_NODE_23238_length_245_cov_2.348837_g23137_i0 PRJNA825466 23238 245 2.348837 5.75465065 Diadema antillarum 105358 Echinodermata other_Eukaryota 135 8.18e-37   NR XP_071501414.1 105358 g23137 i0 72.8 2.97551020408163 81 22 99.2 0 244 2 84 164 XP_071501414.1 LOW QUALITY PROTEIN: cathepsin B-like [Diadema antillarum] diamond 729 135 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;