RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA825466", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA825466 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27623345 27623345 PRJNA825466_P_NODE_7264_length_315_cov_2.355372_g7163_i0 PRJNA825466 7264 315 2.355372 7.4194218 Thamnocephalis sphaerospora 78915 Fungi Fungi 123 1.28e-32   NR RKP05426.1 78915 g7163 i0 57.7 7.8952380952381 104 44 99 0 2 313 13 116 RKP05426.1 large subunit ribosomal protein 1 [Thamnocephalis sphaerospora] diamond 2487 123 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora
28444208 28444208 PRJNA825466_P_NODE_15266_length_256_cov_2.098361_g15165_i0 PRJNA825466 15266 256 2.098361 5.37180416 Smittium culicis 133412 Fungi Fungi 80.9 1.66e-17   NR OMJ17335.1 133412 g15165 i0 78.8 2.51953125 52 11 60.9 0 252 97 57 108 OMJ17335.1 60S ribosomal protein L34-B [Smittium culicis] diamond 645 80.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium culicis
30812696 30812696 PRJNA825466_P_NODE_17754_length_250_cov_0.870056_g17653_i0 PRJNA825466 17754 250 0.870056 2.17514 Basidiobolus ranarum 34480 Fungi Fungi 75.5 1.21e-13   NR KAK9721490.1 34480 g17653 i0 46.3 2.952 82 44 98.4 0 246 1 446 527 KAK9721490.1 hypothetical protein K7432_003371 [Basidiobolus ranarum] diamond 738 75.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;