RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA825466", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA825466 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18671790 18671790 PRJNA825466_P_NODE_555_length_888_cov_2.473620_g476_i0 PRJNA825466 555 888 2.47362 21.9657456 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 129 6.09e-32   NR TEB19254.1 2494336 g476 i0 33.7 0.902027027027027 267 155 84.1 8 46 792 1 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 801 129 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
28191262 28191262 PRJNA825466_P_NODE_8866_length_298_cov_1.368889_g8765_i0 PRJNA825466 8866 298 1.368889 4.07928922 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 54.7 3.37e-6   NR TEB19254.1 2494336 g8765 i0 37.5 1.04697986577181 104 56 95.6 3 13 297 22 125 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 312 54.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
31097004 31097004 PRJNA825466_P_NODE_6415_length_327_cov_1.212598_g6314_i0 PRJNA825466 6415 327 1.212598 3.96519546 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 133 1.33e-36   NR KAF4694606.1 32597 g6314 i0 55.6 8.90825688073394 108 48 99.1 0 2 325 68 175 KAF4694606.1 Proteasome subunit alpha 1, variant 2 [Perkinsus olseni] diamond 2913 133 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;