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contig_metadata

12 rows where bioproject = "PRJNA825466", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 12 ✖

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA825466 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16530781 16530781 PRJNA825466_P_NODE_13513_length_266_cov_1.849741_g13412_i0 PRJNA825466 13513 266 1.849741 4.92031106 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 246 1.0399999999999999e-60   NTclustered gi|301113823|ref|XM_002998636.1| 403677 g13412 i0 84.19 94.1052631578947 253 40 95 0 2 254 870 618 Phytophthora infestans T30-4 ATP synthase subunit beta, putative (PITG_06595), partial mRNA blastn 25032 248 0.991935483870968 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
22497214 22497214 PRJNA825466_P_NODE_7038_length_318_cov_1.257143_g6937_i0 PRJNA825466 7038 318 1.257143 3.99771474 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 144 1.9e-41   NR TMW60107.1 41045 g6937 i0 71.3 7.9811320754717 94 27 88.7 0 37 318 1 94 TMW60107.1 hypothetical protein Poli38472_000149 [Pythium oligandrum] diamond 2538 144 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
25046761 25046761 PRJNA825466_P_NODE_2740_length_438_cov_1.621918_g2639_i0 PRJNA825466 2740 438 1.621918 7.10400084 Phytophthora kernoviae 325452 SAR_Eukaryotes SAR_Eukaryotes 227 5.920000000000001e-70   NR RLN26386.1 325452 g2639 i0 78.3 2.82191780821918 138 30 94.5 0 414 1 179 316 RLN26386.1 hypothetical protein BBI17_008018 [Phytophthora kernoviae] diamond 1236 227 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
28728257 28728257 PRJNA825466_P_NODE_11027_length_281_cov_1.182692_g10926_i0 PRJNA825466 11027 281 1.182692 3.32336452 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 50.4 1.16e-4   NR KAF1320884.1 82926 g10926 i0 28 0.99288256227758 93 64 96.1 1 6 275 460 552 KAF1320884.1 hypothetical protein FI667_g12257, partial [Globisporangium splendens] diamond 279 50.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
28791244 28791244 PRJNA825466_P_NODE_28027_length_241_cov_3.458333_g27926_i0 PRJNA825466 28027 241 3.458333 8.33458253 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 131 5.37e-34   NR KAH9108398.1 100861 g27926 i0 82.4 2.76348547717842 74 13 92.1 0 3 224 407 480 KAH9108398.1 hypothetical protein AeMF1_016428 [Aphanomyces euteiches] diamond 666 131 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
29264802 29264802 PRJNA825466_P_NODE_26169_length_243_cov_0.905882_g26068_i0 PRJNA825466 26169 243 0.905882 2.20129326 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 53.1 7.48e-6   NR OQS01349.1 1202772 g26068 i0 49 0.62962962962963 51 24 63 1 89 241 4 52 OQS01349.1 hypothetical protein ACHHYP_01176 [Achlya hypogyna] diamond 153 53.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
30220984 30220984 PRJNA825466_P_NODE_12912_length_270_cov_1.233503_g12811_i0 PRJNA825466 12912 270 1.233503 3.3304581 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 63.9 1.83e-9   NR KAG7396956.1 109152 g12811 i0 34.7 4.35555555555556 98 55 98.9 2 267 1 11 108 KAG7396956.1 hypothetical protein PHYBOEH_001469 [Phytophthora boehmeriae] diamond 1176 63.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora boehmeriae
30220986 30220986 PRJNA825466_P_NODE_26292_length_243_cov_0.905882_g26191_i0 PRJNA825466 26292 243 0.905882 2.20129326 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00224   NR KAF0756398.1 112090 g26191 i0 37.3 5.17283950617284 59 36 72.8 1 198 22 404 461 KAF0756398.1 hypothetical protein AaE_004647 [Aphanomyces astaci] diamond 1257 46.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31255091 31255091 PRJNA825466_P_NODE_21235_length_247_cov_0.885057_g21134_i0 PRJNA825466 21235 247 0.885057 2.18609079 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 135 9.14e-36   NR TMW57036.1 41045 g21134 i0 75.6 11.6477732793522 78 19 94.7 0 239 6 198 275 TMW57036.1 hypothetical protein Poli38472_002961 [Pythium oligandrum] diamond 2877 135 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31896353 31896353 PRJNA825466_P_NODE_1717_length_532_cov_2.629630_g1618_i0 PRJNA825466 1717 532 2.62963 13.9896316 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 133 8.140000000000001e-36   NR XP_067814377.1 4779 g1618 i0 45.9 7.12218045112782 159 66 88 4 494 27 39 180 XP_067814377.1 hypothetical protein CCR75_006867 [Bremia lactucae] diamond 3789 133 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
32362605 32362605 PRJNA825466_P_NODE_10259_length_286_cov_1.929577_g10158_i0 PRJNA825466 10259 286 1.929577 5.51859022 Phytophthora kernoviae 325452 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0456   NR KAG2506600.1 325452 g10158 i0 41.8 0.576923076923077 55 29 56.6 2 164 3 158 210 KAG2506600.1 hypothetical protein JM16_008512 [Phytophthora kernoviae] diamond 165 43.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
32749796 32749796 PRJNA825466_P_NODE_18140_length_250_cov_0.870056_g18039_i0 PRJNA825466 18140 250 0.870056 2.17514 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 47 0.00134   NR KAJ8578692.1 4785 g18039 i0 33.8 4.788 80 48 90 1 2 226 284 363 KAJ8578692.1 hypothetical protein ON010_g512 [Phytophthora cinnamomi] diamond 1197 47 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;