RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA825466", tax_clade = "Sar" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA825466 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27907047 27907047 PRJNA825466_P_NODE_6285_length_329_cov_1.203125_g6184_i0 PRJNA825466 6285 329 1.203125 3.95828125 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 52 1.39e-5   NR CEO94569.1 37360 g6184 i0 44.2 0.78419452887538 86 47 78.4 1 2 259 43 127 CEO94569.1 hypothetical protein PBRA_000354 [Plasmodiophora brassicae] diamond 258 52 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31919399 31919399 PRJNA825466_P_NODE_9157_length_295_cov_2.045045_g9056_i0 PRJNA825466 9157 295 2.045045 6.03288275 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 122 1.16e-30   NR CEO98766.1 37360 g9056 i0 58.9 8.73559322033898 95 39 96.6 0 287 3 279 373 CEO98766.1 hypothetical protein PBRA_006880 [Plasmodiophora brassicae] diamond 2577 122 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;