contig_metadata
22 rows where bioproject = "PRJNA825466" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3371289 | 3371289 | PRJNA825466_P_NODE_28423_length_241_cov_0.916667_g28322_i0 | PRJNA825466 | 28423 | 241 | 0.916667 | 2.20916747 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|1805906055|gb|CP027004.1| | 239935 | g28322 | i0 | 100 | 100 | 241 | 0 | 100 | 0 | 1 | 241 | 497342 | 497102 | Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome | blastn | 24100 | 446 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 5923646 | 5923646 | PRJNA825466_P_NODE_14625_length_260_cov_1.240642_g14524_i0 | PRJNA825466 | 14625 | 260 | 1.240642 | 3.2256692 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 161 | 4.39e-45 | NR | HVZ93305.1 | 2052180 | g14524 | i0 | 85.9 | 0.980769230769231 | 85 | 12 | 98.1 | 0 | 6 | 260 | 218 | 302 | HVZ93305.1 adenosylhomocysteinase [Phycisphaerales bacterium] | diamond | 255 | 161 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 16123083 | 16123083 | PRJNA825466_S_NODE_1793_length_245_cov_0.895349_g1787_i0 | PRJNA825466 | 1793 | 245 | 0.895349 | 2.19360505 | Fimbriiglobus sp. | 1914235 | Bacteria | Bacteria | 92 | 4.06e-20 | NR | HET6572422.1 | 1914235 | g1787 | i0 | 75 | 1.37142857142857 | 56 | 14 | 68.6 | 0 | 75 | 242 | 58 | 113 | HET6572422.1 fused MFS/spermidine synthase [Fimbriiglobus sp.] | diamond | 336 | 92 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Fimbriiglobus | Fimbriiglobus sp. | |
| 26896453 | 26896453 | PRJNA825466_P_NODE_28041_length_241_cov_2.375000_g27940_i0 | PRJNA825466 | 28041 | 241 | 2.375 | 5.72375 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 87.8 | 2.49e-18 | NR | HEY7428810.1 | 2052164 | g27940 | i0 | 71.9 | 0.70954356846473 | 57 | 16 | 71 | 0 | 173 | 3 | 1 | 57 | HEY7428810.1 prenyltransferase/squalene oxidase repeat-containing protein [Gemmataceae bacterium] | diamond | 171 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 26896454 | 26896454 | PRJNA825466_S_NODE_1861_length_244_cov_0.900585_g1855_i0 | PRJNA825466 | 1861 | 244 | 0.900585 | 2.1974274 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 89.7 | 1.11e-18 | NR | MFO0788448.1 | 2715253 | g1855 | i0 | 56 | 0.922131147540984 | 75 | 33 | 92.2 | 0 | 16 | 240 | 26 | 100 | MFO0788448.1 RICIN domain-containing protein [Pirellulales bacterium] | diamond | 225 | 89.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 27086155 | 27086155 | PRJNA825466_P_NODE_10242_length_287_cov_0.827103_g10141_i0 | PRJNA825466 | 10242 | 287 | 0.827103 | 2.37378561 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 45.1 | 0.00618 | NR | MEI6341235.1 | 2026799 | g10141 | i0 | 37.9 | 0.606271777003484 | 58 | 34 | 58.5 | 1 | 58 | 225 | 109 | 166 | MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] | diamond | 174 | 45.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27718253 | 27718253 | PRJNA825466_P_NODE_4024_length_380_cov_1.788274_g3923_i0 | PRJNA825466 | 4024 | 380 | 1.788274 | 6.7954412 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 59.7 | 1.81e-7 | NR | MEW6160311.1 | 2026799 | g3923 | i0 | 50.7 | 0.592105263157895 | 75 | 32 | 55.3 | 2 | 374 | 165 | 274 | 348 | MEW6160311.1 HYR domain-containing protein [Verrucomicrobiota bacterium] | diamond | 225 | 59.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28254508 | 28254508 | PRJNA825466_P_NODE_14746_length_259_cov_1.655914_g14645_i0 | PRJNA825466 | 14746 | 259 | 1.655914 | 4.28881726 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 86.7 | 6.09e-19 | NR | UCG59062.1 | 2052180 | g14645 | i0 | 52.4 | 0.972972972972973 | 84 | 40 | 97.3 | 0 | 5 | 256 | 43 | 126 | UCG59062.1 MAG: hypothetical protein JSU70_06045 [Phycisphaerales bacterium] | diamond | 252 | 86.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 28981021 | 28981021 | PRJNA825466_P_NODE_9888_length_289_cov_1.370370_g9787_i0 | PRJNA825466 | 9888 | 289 | 1.37037 | 3.9603693 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 88.6 | 2.37e-18 | NR | RYD71398.1 | 2026800 | g9787 | i0 | 46.4 | 0.8719723183391 | 84 | 45 | 87.2 | 0 | 286 | 35 | 119 | 202 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 252 | 88.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 29675109 | 29675109 | PRJNA825466_P_NODE_19690_length_248_cov_1.342857_g19589_i0 | PRJNA825466 | 19690 | 248 | 1.342857 | 3.33028536 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 141 | 6.8399999999999995e-37 | NR | MBM3869833.1 | 2026799 | g19589 | i0 | 82.5 | 0.967741935483871 | 80 | 14 | 96.8 | 0 | 240 | 1 | 546 | 625 | MBM3869833.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 240 | 141 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30023042 | 30023042 | PRJNA825466_P_NODE_16151_length_251_cov_1.730337_g16050_i0 | PRJNA825466 | 16151 | 251 | 1.730337 | 4.34314587 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 73.2 | 7.95e-13 | NR | MSR63205.1 | 2026780 | g16050 | i0 | 45.3 | 2.85657370517928 | 75 | 36 | 89.6 | 1 | 250 | 26 | 357 | 426 | MSR63205.1 HYR domain-containing protein [Planctomycetota bacterium] | diamond | 717 | 73.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30505514 | 30505514 | PRJNA825466_P_NODE_1813_length_520_cov_2.612975_g1714_i0 | PRJNA825466 | 1813 | 520 | 2.612975 | 13.58747 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 176 | 3.87e-50 | NR | WP_018970930.1 | 361055 | g1714 | i0 | 51.1 | 5.91923076923077 | 174 | 79 | 98.1 | 3 | 514 | 5 | 207 | 378 | WP_018970930.1 glycoside hydrolase family 75 protein [Rubritalea marina] | diamond | 3078 | 176 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Rubritaleaceae | Rubritalea | Rubritalea marina | |
| 30528326 | 30528326 | PRJNA825466_P_NODE_13673_length_265_cov_2.218750_g13572_i0 | PRJNA825466 | 13673 | 265 | 2.21875 | 5.8796875 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 75.1 | 1.73e-13 | NR | MCA8997906.1 | 2026779 | g13572 | i0 | 75 | 0.49811320754717 | 44 | 11 | 49.8 | 0 | 264 | 133 | 361 | 404 | MCA8997906.1 SpoVR family protein [Planctomycetaceae bacterium] | diamond | 132 | 75.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 30528327 | 30528327 | PRJNA825466_P_NODE_29813_length_222_cov_7.167785_g29712_i0 | PRJNA825466 | 29813 | 222 | 7.167785 | 15.9124827 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 42.4 | 0.0388 | NR | MBP6506442.1 | 2006848 | g29712 | i0 | 42.9 | 0.567567567567568 | 42 | 24 | 56.8 | 0 | 130 | 5 | 185 | 226 | MBP6506442.1 alpha-galactosidase [Opitutaceae bacterium] | diamond | 126 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 31010914 | 31010914 | PRJNA825466_P_NODE_17334_length_250_cov_1.497175_g17233_i0 | PRJNA825466 | 17334 | 250 | 1.497175 | 3.7429375 | PVC group | 1783257 | Bacteria | Bacteria | 47.8 | 7.05e-4 | NR | HSW87035.1 | 2047756 | g17233 | i0 | 33.8 | 2.844 | 77 | 47 | 88.8 | 2 | 223 | 2 | 602 | 677 | HSW87035.1 CDC27 family protein [Rhabdochlamydiaceae bacterium] | diamond | 711 | 47.8 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 31159909 | 31159909 | PRJNA825466_S_NODE_2055_length_241_cov_0.916667_g2049_i0 | PRJNA825466 | 2055 | 241 | 0.916667 | 2.20916747 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 124 | 8.55e-32 | NR | MCK6483905.1 | 2026778 | g2049 | i0 | 73.4 | 0.983402489626556 | 79 | 21 | 98.3 | 0 | 3 | 239 | 56 | 134 | MCK6483905.1 PilT/PilU family type 4a pilus ATPase [Phycisphaerae bacterium] | diamond | 237 | 124 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 31413313 | 31413313 | PRJNA825466_P_NODE_24636_length_244_cov_0.900585_g24535_i0 | PRJNA825466 | 24636 | 244 | 0.900585 | 2.1974274 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 55.8 | 9.11e-7 | NR | MFH0983654.1 | 2026780 | g24535 | i0 | 55.3 | 1.04508196721311 | 38 | 17 | 46.7 | 0 | 117 | 4 | 280 | 317 | MFH0983654.1 thrombospondin type 3 repeat-containing protein [Planctomycetota bacterium] | diamond | 255 | 55.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31611796 | 31611796 | PRJNA825466_P_NODE_26136_length_243_cov_0.905882_g26035_i0 | PRJNA825466 | 26136 | 243 | 0.905882 | 2.20129326 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 87 | 3.81e-18 | NR | MBS0626875.1 | 2026799 | g26035 | i0 | 63.8 | 1.97530864197531 | 80 | 23 | 98.8 | 3 | 3 | 242 | 51 | 124 | MBS0626875.1 MFS transporter [Verrucomicrobiota bacterium] | diamond | 480 | 87 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32109245 | 32109245 | PRJNA825466_P_NODE_10718_length_283_cov_1.361905_g10617_i0 | PRJNA825466 | 10718 | 283 | 1.361905 | 3.85419115 | Tepidisphaeraceae bacterium | 2876886 | Bacteria | Bacteria | 87.4 | 1.16e-17 | NR | HEX8324621.1 | 2876886 | g10617 | i0 | 47.9 | 0.996466431095406 | 94 | 49 | 99.6 | 0 | 283 | 2 | 381 | 474 | HEX8324621.1 GTPase domain-containing protein [Tepidisphaeraceae bacterium] | diamond | 282 | 87.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Tepidisphaeraceae bacterium | ||
| 32236150 | 32236150 | PRJNA825466_S_NODE_1698_length_246_cov_0.890173_g1692_i0 | PRJNA825466 | 1698 | 246 | 0.890173 | 2.18982558 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.1 | 0.0278 | NR | MBI5367152.1 | 2026780 | g1692 | i0 | 47.5 | 0.719512195121951 | 59 | 25 | 69.5 | 2 | 232 | 62 | 548 | 602 | MBI5367152.1 hypothetical protein [Planctomycetota bacterium] | diamond | 177 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32520818 | 32520818 | PRJNA825466_P_NODE_21019_length_247_cov_0.885057_g20918_i0 | PRJNA825466 | 21019 | 247 | 0.885057 | 2.18609079 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 120 | 6.62e-30 | NR | MDA7886108.1 | 2715253 | g20918 | i0 | 66.3 | 0.97165991902834 | 80 | 27 | 97.2 | 0 | 5 | 244 | 260 | 339 | MDA7886108.1 glycosyltransferase family 4 protein [Pirellulales bacterium] | diamond | 240 | 120 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 32615262 | 32615262 | PRJNA825466_P_NODE_28900_length_241_cov_0.916667_g28799_i0 | PRJNA825466 | 28900 | 241 | 0.916667 | 2.20916747 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 144 | 1.3899999999999999e-40 | NR | MBM3965989.1 | 2026780 | g28799 | i0 | 97.5 | 12.7842323651452 | 79 | 2 | 98.3 | 0 | 239 | 3 | 145 | 223 | MBM3965989.1 acetyl-CoA carboxylase carboxyltransferase subunit beta [Planctomycetota bacterium] | diamond | 3081 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;