RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA825466", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA825466 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3371224 3371224 PRJNA825466_P_NODE_11563_length_277_cov_2.583333_g11462_i0 PRJNA825466 11563 277 2.583333 7.15583241 Eukaryota 2759 Fungi Fungi 144 2.7799999999999993e-40   NR KAJ3101567.1 1352834 g11462 i0 70.3 8.87003610108303 91 27 98.6 0 275 3 70 160 KAJ3101567.1 structural constituent of ribosome [Phlyctochytrium bullatum] diamond 2457 145 0.993103448275862 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium bullatum
14848488 14848488 PRJNA825466_P_NODE_21072_length_247_cov_0.885057_g20971_i0 PRJNA825466 21072 247 0.885057 2.18609079 Neocallimastix lanati (nom. inval.) 2767002 Fungi Fungi 137 1.06e-39   NR KAG4094556.1 2767002 g20971 i0 80.5 2.98785425101215 82 16 99.6 0 2 247 2 83 KAG4094556.1 40S ribosomal protein S13 [Neocallimastix lanati (nom. inval.)] diamond 738 137 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix lanati (nom. inval.)
28538994 28538994 PRJNA825466_P_NODE_5327_length_346_cov_2.007326_g5226_i0 PRJNA825466 5327 346 2.007326 6.94534796 Cladochytrium tenue 1604274 Fungi Fungi 128 1.53e-35   NR KAJ1568581.1 1604274 g5226 i0 48.3 2.01156069364162 116 59 99.7 1 346 2 8 123 KAJ1568581.1 60S ribosomal protein L27 [Cladochytrium tenue] diamond 696 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
29170402 29170402 PRJNA825466_P_NODE_12309_length_273_cov_1.540000_g12208_i0 PRJNA825466 12309 273 1.54 4.2042 Fimicolochytrium jonesii 1396493 Fungi Fungi 48.5 5.13e-4   NR XP_052923187.1 1396493 g12208 i0 28.9 1.97802197802198 90 56 97.8 3 270 4 91 173 XP_052923187.1 quinon protein alcohol dehydrogenase-like superfamily [Fimicolochytrium jonesii] diamond 540 48.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
29359795 29359795 PRJNA825466_P_NODE_28049_length_241_cov_2.214286_g27948_i0 PRJNA825466 28049 241 2.214286 5.33642926 Spizellomyces punctatus DAOM BR117 645134 Fungi Fungi 53.5 5.95e-6   NR XP_016609587.1 645134 g27948 i0 46.7 1.45643153526971 60 32 74.7 0 181 2 974 1033 XP_016609587.1 uncharacterized protein SPPG_03349 [Spizellomyces punctatus DAOM BR117] diamond 351 53.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
32709613 32709613 PRJNA825466_P_NODE_29460_length_236_cov_2.368098_g29359_i0 PRJNA825466 29460 236 2.368098 5.58871128 Hyaloraphidium curvatum 82268 Fungi Fungi 69.7 1.06e-11   NR KAI9002878.1 82268 g29359 i0 52.6 1.46186440677966 57 27 72.5 0 234 64 475 531 KAI9002878.1 serine/threonine-protein kinase nrc-2 [Hyaloraphidium curvatum] diamond 345 69.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;