RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA825466", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA825466 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31381791 31381791 PRJNA825466_P_NODE_11256_length_279_cov_2.101942_g11155_i0 PRJNA825466 11256 279 2.101942 5.86441818 Prymnesium parvum 97485 Haptophyta other_Eukaryota 68.9 3.57e-11   NR KAL1502925.1 97485 g11155 i0 36.7 1.68817204301075 79 48 84.9 1 267 31 219 295 KAL1502925.1 hypothetical protein AB1Y20_010997 [Prymnesium parvum] diamond 471 68.9 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
32907156 32907156 PRJNA825466_P_NODE_10720_length_283_cov_1.328571_g10619_i0 PRJNA825466 10720 283 1.328571 3.75985593 root 1 Root_unresolved Root_unresolved 78.2 1.15e-14   NR XP_005772437.1 280463 g10619 i0 40.2 2.7773851590106 92 55 97.5 0 276 1 48 139 XP_005772437.1 hypothetical protein EMIHUDRAFT_355256 [Emiliania huxleyi CCMP1516] diamond 786 78.2 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;