RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA825466" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA825466 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26611096 26611096 PRJNA825466_S_NODE_1921_length_243_cov_0.905882_g1915_i0 PRJNA825466 1921 243 0.905882 2.20129326 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 78.6 5.71e-16   NR MBI4013470.1 2053607 g1915 i0 45.7 1 81 43 100 1 1 243 71 150 MBI4013470.1 WYL domain-containing protein [Candidatus Rokuibacteriota bacterium] diamond 243 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27086157 27086157 PRJNA825466_P_NODE_28902_length_241_cov_0.916667_g28801_i0 PRJNA825466 28902 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 82.4 2.74e-16   NR MFA7193696.1 2053589 g28801 i0 48 0.933609958506224 75 39 93.4 0 11 235 153 227 MFA7193696.1 AAA family ATPase [Candidatus Paceibacterota bacterium] diamond 225 82.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32425692 32425692 PRJNA825466_P_NODE_24659_length_244_cov_0.900585_g24558_i0 PRJNA825466 24659 244 0.900585 2.1974274 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 63.9 1.31e-9   NR MDW8328439.1 2306012 g24558 i0 48.8 0.983606557377049 80 38 98.4 1 2 241 464 540 MDW8328439.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Bipolaricaulota bacterium] diamond 240 63.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;