RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA825466", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA825466 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27307482 27307482 PRJNA825466_P_NODE_23843_length_245_cov_0.895349_g23742_i0 PRJNA825466 23843 245 0.895349 2.19360505 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 2.0499999999999999e-23   NR XP_013756945.1 461836 g23742 i0 61.3 0.979591836734694 80 31 98 0 6 245 210 289 XP_013756945.1 glutaminyl-tRNA synthetase [Thecamonas trahens ATCC 50062] diamond 240 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30023046 30023046 PRJNA825466_P_NODE_29771_length_226_cov_2.764706_g29670_i0 PRJNA825466 29771 226 2.764706 6.24823556 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 59.7 2.37e-8   NR XP_013759479.1 461836 g29670 i0 51.5 0.876106194690266 66 29 83.6 2 24 212 1 66 XP_013759479.1 uncharacterized protein AMSG_02572 [Thecamonas trahens ATCC 50062] diamond 198 59.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;