RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA816527" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA816527 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5922904 5922904 PRJNA816527_P_NODE_5925_length_420_cov_3.504323_g5875_i0 PRJNA816527 5925 420 3.504323 14.7181566 Philodina citrina 468664 Rotifera other_Eukaryota 366 1.2699999999999993e-96   NTclustered gi|407227484|emb|FR856884.1| 468664 g5875 i0 83.138 35.2547619047619 427 47 99 22 4 420 2208 1797 Philodina citrina complete mitochondrial genome blastn 14807 366 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
7197363 7197363 PRJNA816527_P_NODE_10246_length_328_cov_1.760784_g10196_i0 PRJNA816527 10246 328 1.760784 5.77537152 Rotaria 231623 Rotifera other_Eukaryota 217 6.060000000000001e-70   NR CAF3810701.1 392030 g10196 i0 91.7 2.99085365853659 109 9 99.7 0 1 327 30 138 CAF3810701.1 unnamed protein product [Rotaria magnacalcarata] diamond 981 217 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
26619923 26619923 PRJNA816527_P_NODE_19541_length_244_cov_0.900585_g19491_i0 PRJNA816527 19541 244 0.900585 2.1974274 Eurotatoria 2816136 Rotifera other_Eukaryota 140 1.65e-36   NR UJR26868.1 104782 g19491 i0 79 2.98770491803279 81 17 99.6 0 244 2 267 347 UJR26868.1 hypothetical protein I4U23_008179 [Adineta vaga] diamond 729 140 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
26959347 26959347 PRJNA816527_P_NODE_15182_length_268_cov_1.579487_g15132_i0 PRJNA816527 15182 268 1.579487 4.23302516 Rotaria sordida 392033 Rotifera other_Eukaryota 137 2.7899999999999997e-35   NR CAF1169739.1 392033 g15132 i0 70.1 4.91417910447761 87 26 97.4 0 2 262 254 340 CAF1169739.1 unnamed protein product [Rotaria sordida] diamond 1317 137 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida
27054524 27054524 PRJNA816527_P_NODE_20702_length_239_cov_2.777108_g20652_i0 PRJNA816527 20702 239 2.777108 6.63728812 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 63.5 1.3e-9   NR CAF3779341.1 392030 g20652 i0 59.6 2.47280334728033 47 19 59 0 145 5 42 88 CAF3779341.1 unnamed protein product [Rotaria magnacalcarata] diamond 591 63.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
27189431 27189431 PRJNA816527_P_NODE_14822_length_272_cov_1.547739_g14772_i0 PRJNA816527 14822 272 1.547739 4.20985008 Rotaria 231623 Rotifera other_Eukaryota 168 1.61e-48   NR CAF0926538.1 392033 g14772 i0 96.6 5.75735294117647 87 3 96 0 270 10 122 208 CAF0926538.1 unnamed protein product [Rotaria sordida] diamond 1566 169 0.994082840236686 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;