contig_metadata
12 rows where bioproject = "PRJNA816527" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3370168 | 3370168 | PRJNA816527_P_NODE_13943_length_281_cov_1.480769_g13893_i0 | PRJNA816527 | 13943 | 281 | 1.480769 | 4.16096089 | Pedobacter sp. SL55 | 2995161 | Bacteria | Bacteria | 451 | 2.19e-122 | NTclustered | gi|2381133349|gb|CP113059.1| | 2995161 | g13893 | i0 | 95.714 | 292.626334519573 | 280 | 12 | 99 | 0 | 1 | 280 | 2089 | 1810 | Pedobacter sp. SL55 chromosome | blastn | 82228 | 451 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter sp. SL55 | |
| 4647852 | 4647852 | PRJNA816527_P_NODE_19124_length_245_cov_0.895349_g19074_i0 | PRJNA816527 | 19124 | 245 | 0.895349 | 2.19360505 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|1527187866|gb|CP034161.1| | 2487072 | g19074 | i0 | 100 | 367.673469387755 | 245 | 0 | 100 | 0 | 1 | 245 | 807180 | 806936 | Epilithonimonas vandammei strain F5649 chromosome, complete genome | blastn | 90080 | 453 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 5922623 | 5922623 | PRJNA816527_P_NODE_16705_length_251_cov_1.460674_g16655_i0 | PRJNA816527 | 16705 | 251 | 1.460674 | 3.66629174 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 128 | 2.15e-34 | NR | MDQ8036280.1 | 1411316 | g16655 | i0 | 88.3 | 1.8406374501992 | 77 | 9 | 92 | 0 | 5 | 235 | 128 | 204 | MDQ8036280.1 M48 family metallopeptidase [Pedobacter sp.] | diamond | 462 | 129 | 0.992248062015504 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter sp. | |
| 6332054 | 6332054 | PRJNA816527_P_NODE_20225_length_242_cov_0.911243_g20175_i0 | PRJNA816527 | 20225 | 242 | 0.911243 | 2.20520806 | Chryseobacterium | 59732 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1519503470|gb|CP033928.1| | 254 | g20175 | i0 | 100 | 474.851239669421 | 242 | 0 | 100 | 0 | 1 | 242 | 1185115 | 1185356 | Chryseobacterium indoltheticum strain G0211 chromosome, complete genome | blastn | 114914 | 448 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indoltheticum | |
| 10156447 | 10156447 | PRJNA816527_P_NODE_11948_length_304_cov_2.246753_g11898_i0 | PRJNA816527 | 11948 | 304 | 2.246753 | 6.83012912 | Flavobacterium | 237 | Bacteria | Bacteria | 385 | 2.46e-102 | NTclustered | gi|1481170622|gb|CP023642.1| | 459526 | g11898 | i0 | 89.474 | 535.996710526316 | 304 | 32 | 100 | 0 | 1 | 304 | 1125431 | 1125734 | Flavobacterium anhuiense strain M168 chromosome, complete genome | blastn | 162943 | 385 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium anhuiense | |
| 10156502 | 10156502 | PRJNA816527_P_NODE_3428_length_548_cov_2.338947_g3378_i0 | PRJNA816527 | 3428 | 548 | 2.338947 | 12.81742956 | Flavobacterium | 237 | Bacteria | Bacteria | 880 | 0 | NTclustered | gi|2447257787|gb|CP092822.1| | 1454066 | g3378 | i0 | 95.62 | 438.027372262774 | 548 | 24 | 100 | 0 | 1 | 548 | 1450609 | 1451156 | Flavobacterium sp. WW92 chromosome, complete genome | blastn | 240039 | 880 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. WW92 | |
| 12298681 | 12298681 | PRJNA816527_P_NODE_19770_length_243_cov_0.905882_g19720_i0 | PRJNA816527 | 19770 | 243 | 0.905882 | 2.20129326 | Chryseobacterium indologenes | 253 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1158824264|gb|CP018786.1| | 253 | g19720 | i0 | 100 | 515.851851851852 | 243 | 0 | 100 | 0 | 1 | 243 | 457417 | 457175 | Chryseobacterium indologenes strain AA5 chromosome, complete genome | blastn | 125352 | 449 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium indologenes | |
| 15256035 | 15256035 | PRJNA816527_P_NODE_6892_length_392_cov_1.376176_g6842_i0 | PRJNA816527 | 6892 | 392 | 1.376176 | 5.39460992 | Myroides | 76831 | Bacteria | Bacteria | 697 | 0 | NTclustered | gi|2636494101|gb|CP139975.1| | 256 | g6842 | i0 | 98.724 | 685.474489795918 | 392 | 5 | 100 | 0 | 1 | 392 | 484489 | 484880 | Myroides odoratus strain HAMBI_1923 chromosome, complete genome | blastn | 268706 | 697 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Myroides | Myroides odoratus | |
| 16122061 | 16122061 | PRJNA816527_P_NODE_18593_length_246_cov_1.404624_g18543_i0 | PRJNA816527 | 18593 | 246 | 1.404624 | 3.45537504 | Sediminibacterium sp. KACHI17 | 1751071 | Bacteria | Bacteria | 147 | 9.909999999999998e-31 | NTclustered | gi|2690291631|dbj|AP029612.1| | 1751071 | g18543 | i0 | 83.974 | 52.390243902439 | 156 | 21 | 63 | 4 | 48 | 201 | 1131534 | 1131687 | Sediminibacterium sp. KACHI17 DNA, complete genome | blastn | 12888 | 147 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Sediminibacterium | Sediminibacterium sp. KACHI17 | |
| 19079554 | 19079554 | PRJNA816527_P_NODE_14535_length_275_cov_1.450495_g14485_i0 | PRJNA816527 | 14535 | 275 | 1.450495 | 3.98886125 | Flavobacterium | 237 | Bacteria | Bacteria | 350 | 8e-92 | NTclustered | gi|2447257787|gb|CP092822.1| | 1454066 | g14485 | i0 | 90.805 | 1.89818181818182 | 261 | 24 | 95 | 0 | 1 | 261 | 3764135 | 3763875 | Flavobacterium sp. WW92 chromosome, complete genome | blastn | 522 | 350 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. WW92 | |
| 24179619 | 24179619 | PRJNA816527_P_NODE_18159_length_247_cov_2.551724_g18109_i0 | PRJNA816527 | 18159 | 247 | 2.551724 | 6.30275828 | Flavobacterium | 237 | Bacteria | Bacteria | 405 | 1.49e-108 | NTclustered | gi|2279330881|gb|CP101751.1| | 2502784 | g18109 | i0 | 96.341 | 476.206477732794 | 246 | 9 | 99 | 0 | 2 | 247 | 717924 | 718169 | Flavobacterium cerinum strain C1 chromosome, complete genome | blastn | 117623 | 405 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium cerinum | |
| 27433928 | 27433928 | PRJNA816527_P_NODE_6603_length_399_cov_2.340491_g6553_i0 | PRJNA816527 | 6603 | 399 | 2.340491 | 9.33855909 | Phocaeicola vulgatus | 821 | Bacteria | Bacteria | 134 | 1.21e-37 | NR | WP_050229787.1 | 821 | g6553 | i0 | 99.2 | 0.954887218045113 | 127 | 1 | 95.5 | 0 | 12 | 392 | 1 | 127 | WP_050229787.1 hypothetical protein [Phocaeicola vulgatus] | diamond | 381 | 134 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola vulgatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;