RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA816527", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA816527 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9747528 9747528 PRJNA816527_P_NODE_19228_length_245_cov_0.895349_g19178_i0 PRJNA816527 19228 245 0.895349 2.19360505 Gigantopelta aegis 1735272 Mollusca Mollusca 99 1.5099999999999998e-23   NR XP_041379271.1 1735272 g19178 i0 62.2 1.9469387755102 82 28 98 3 244 5 28 108 XP_041379271.1 LOW QUALITY PROTEIN: prolyl 3-hydroxylase OGFOD1-like [Gigantopelta aegis] diamond 477 99 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
24179635 24179635 PRJNA816527_P_NODE_20759_length_232_cov_2.421384_g20709_i0 PRJNA816527 20759 232 2.421384 5.61761088 Hygromiidae 133184 Mollusca Mollusca 121 5.61e-23   NTclustered gi|880805121|gb|KT000492.1| 1678615 g20709 i0 84.553 46.5258620689655 123 18 53 1 1 122 495 373 Caucasigena eichwaldi voucher ZMH-100598-1783 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 10794 121 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Hygromiidae Caucasigena Caucasigena eichwaldi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;