RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA816047" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA816047 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32976582 32976582 PRJNA816047d_S_NODE_88298_length_257_cov_1.426471_g86463_i0 PRJNA816047 88298 257 1.426471 3.66603047 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 106 4.35e-26   NR KAF4725977.1 32597 g86463 i0 54.8 7.80933852140078 84 38 98.1 0 256 5 27 110 KAF4725977.1 hypothetical protein FOZ63_008683, partial [Perkinsus olseni] diamond 2007 107 0.990654205607477 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
33095845 33095845 PRJNA816047d_S_NODE_29830_length_390_cov_3.679525_g27998_i0 PRJNA816047 29830 390 3.679525 14.3501475 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 75.1 9.27e-13   NR KAF4675905.1 32597 g27998 i0 45.6 8.46153846153846 79 43 60.8 0 3 239 797 875 KAF4675905.1 SRSF protein kinase 2 [Perkinsus olseni] diamond 3300 75.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
33112720 33112720 PRJNA816047d_S_NODE_117542_length_242_cov_1.518519_g115707_i0 PRJNA816047 117542 242 1.518519 3.67481598 Perkinsus 28000 SAR_Eukaryotes SAR_Eukaryotes 58.9 5.76e-8   NR KAF4725859.1 32597 g115707 i0 38.9 2.50413223140496 72 39 83.1 1 37 237 33 104 KAF4725859.1 hypothetical protein FOZ63_016683 [Perkinsus olseni] diamond 606 59.3 0.993254637436762 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;