RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA816047" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA816047 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25602109 25602109 PRJNA816047d_S_NODE_153737_length_213_cov_11858.462500_g151902_i0 PRJNA816047 153737 213 11858.4625 25258.525125 Gallid alphaherpesvirus 1 10386 Viruses Viruses 75 4e-9   NTclustered gi|2451391033|gb|OQ354889.1| 10386 g151902 i0 100 199.389671361502 40 0 19 0 22 61 139632 139593 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CUD_1/6th_UL12, complete genome blastn 42470 75 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
25737937 25737937 PRJNA816047d_S_NODE_135266_length_226_cov_364.763006_g133431_i0 PRJNA816047 135266 226 364.763006 824.36439356 Gallid alphaherpesvirus 1 10386 Viruses Viruses 73.1 1.54e-8   NTclustered gi|2451390879|gb|OQ354887.1| 10386 g133431 i0 95.556 193.575221238938 45 2 20 0 171 215 372 328 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CPBDh_UL12, complete genome blastn 43748 73.1 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
25874726 25874726 PRJNA816047d_S_NODE_199907_length_199_cov_8784.424658_g198072_i0 PRJNA816047 199907 199 8784.424658 17481.00506942 Gallid alphaherpesvirus 1 10386 Viruses Viruses 80.5 7.92e-11   NTclustered gi|2451391033|gb|OQ354889.1| 10386 g198072 i0 97.826 216.562814070352 46 1 23 0 138 183 139591 139636 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CUD_1/6th_UL12, complete genome blastn 43096 80.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
26009727 26009727 PRJNA816047d_S_NODE_126284_length_234_cov_68521.734807_g124449_i0 PRJNA816047 126284 234 68521.734807 160340.85944838 Gallid alphaherpesvirus 1 10386 Viruses Viruses 76.8 1.24e-9   NTclustered gi|2451390879|gb|OQ354887.1| 10386 g124449 i0 97.727 179.717948717949 44 1 19 0 170 213 139663 139706 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CPBDh_UL12, complete genome blastn 42054 76.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
26009866 26009866 PRJNA816047d_S_NODE_130084_length_230_cov_107884.531073_g128249_i0 PRJNA816047 130084 230 107884.531073 248134.4214679 Gallid alphaherpesvirus 1 10386 Viruses Viruses 73.1 1.58e-8   NTclustered gi|2451390879|gb|OQ354887.1| 10386 g128249 i0 97.619 183.560869565217 42 1 18 0 18 59 334 375 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CPBDh_UL12, complete genome blastn 42219 73.1 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
26146780 26146780 PRJNA816047d_S_NODE_170005_length_207_cov_7480.461039_g168170_i0 PRJNA816047 170005 207 7480.461039 15484.55435073 Gallid alphaherpesvirus 1 10386 Viruses Viruses 73.1 1.39e-8   NTclustered gi|2451390879|gb|OQ354887.1| 10386 g168170 i0 100 192.096618357488 39 0 19 0 21 59 139707 139669 Mutant Gallid alphaherpesvirus 1 isolate CSW-1_CPBDh_UL12, complete genome blastn 39764 73.1 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;