RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA816047", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 6 ✖

tax_phylum 1

  • Cossaviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA816047 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25873013 25873013 PRJNA816047d_S_NODE_112403_length_244_cov_134.811518_g110568_i0 PRJNA816047 112403 244 134.811518 328.94010392 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 69.4 2.19e-7   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g110568 i0 100 0.151639344262295 37 0 15 0 39 75 1726 1690 Anas platyrhynchos papillomavirus 2, complete genome blastn 37 69.4 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
26145923 26145923 PRJNA816047d_S_NODE_127565_length_233_cov_3843.566667_g125730_i0 PRJNA816047 127565 233 3843.566667 8955.51033411 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 63.9 9.63e-6   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g125730 i0 100 0.394849785407725 34 0 15 0 42 75 1725 1692 Anas platyrhynchos papillomavirus 2, complete genome blastn 92 63.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
26282252 26282252 PRJNA816047d_S_NODE_137590_length_224_cov_176.228070_g135755_i0 PRJNA816047 137590 224 176.22807 394.7508768 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 62.1 3.31e-5   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g135755 i0 100 0.147321428571429 33 0 15 0 153 185 1693 1725 Anas platyrhynchos papillomavirus 2, complete genome blastn 33 62.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
26282910 26282910 PRJNA816047d_S_NODE_176750_length_205_cov_4553.947368_g174915_i0 PRJNA816047 176750 205 4553.947368 9335.5921044 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 62.1 2.97e-5   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g174915 i0 100 0.160975609756098 33 0 16 0 132 164 1693 1725 Anas platyrhynchos papillomavirus 2, complete genome blastn 33 62.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
26285771 26285771 PRJNA816047d_S_NODE_62590_length_286_cov_11075.266094_g60755_i0 PRJNA816047 62590 286 11075.266094 31675.26102884 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 63.9 1.22e-5   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g60755 i0 100 0.118881118881119 34 0 12 0 44 77 1725 1692 Anas platyrhynchos papillomavirus 2, complete genome blastn 34 63.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2
26555159 26555159 PRJNA816047d_S_NODE_204504_length_198_cov_4771.275862_g202669_i0 PRJNA816047 204504 198 4771.275862 9447.12620676 Anas platyrhynchos papillomavirus 2 2855326 Viruses Viruses 62.1 2.85e-5   NTclustered gi|2063549401|gb|MW888448.1| 2855326 g202669 i0 100 0.166666666666667 33 0 17 0 42 74 1725 1693 Anas platyrhynchos papillomavirus 2, complete genome blastn 33 62.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae   Anas platyrhynchos papillomavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;