contig_metadata
8 rows where bioproject = "PRJNA816047" and tax_phylum = "Bacillariophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25876885 | 25876885 | PRJNA816047d_S_NODE_54995_length_301_cov_1.689516_g53160_i0 | PRJNA816047 | 54995 | 301 | 1.689516 | 5.08544316 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 179 | 1.17e-49 | NR | CAJ1966911.1 | 2856 | g53160 | i0 | 91 | 102.099667774086 | 89 | 8 | 88.7 | 0 | 299 | 33 | 889 | 977 | CAJ1966911.1 unnamed protein product [Cylindrotheca closterium] | diamond | 30732 | 180 | 0.994444444444444 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Cylindrotheca | Cylindrotheca closterium | ||
| 32956609 | 32956609 | PRJNA816047d_S_NODE_84994_length_259_cov_1.883495_g83159_i0 | PRJNA816047 | 84994 | 259 | 1.883495 | 4.87825205 | Cyclotella atomus | 382360 | SAR_Eukaryotes | SAR_Eukaryotes | 107 | 2.35e-25 | NR | KAL3779121.1 | 382360 | g83159 | i0 | 55.7 | 0.915057915057915 | 79 | 33 | 89.2 | 1 | 3 | 233 | 321 | 399 | KAL3779121.1 hypothetical protein ACHAWO_004576, partial [Cyclotella atomus] | diamond | 237 | 107 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella atomus | ||
| 32959470 | 32959470 | PRJNA816047d_S_NODE_56330_length_298_cov_2.110204_g54495_i0 | PRJNA816047 | 56330 | 298 | 2.110204 | 6.28840792 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 94.7 | 2.11e-22 | NR | GFH51382.1 | 426638 | g54495 | i0 | 58.4 | 14.8590604026846 | 77 | 32 | 77.5 | 0 | 294 | 64 | 64 | 140 | GFH51382.1 ribosomal L23-domain-containing protein [Chaetoceros tenuissimus] | diamond | 4428 | 95.5 | 0.991623036649215 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Chaetocerotales | Chaetocerotaceae | Chaetoceros | Chaetoceros tenuissimus | ||
| 33007648 | 33007648 | PRJNA816047d_S_NODE_75379_length_266_cov_3.361502_g73544_i0 | PRJNA816047 | 75379 | 266 | 3.361502 | 8.94159532 | Chaetoceros tenuissimus | 426638 | SAR_Eukaryotes | SAR_Eukaryotes | 76.3 | 4.02e-14 | NR | GFH48322.1 | 426638 | g73544 | i0 | 51.6 | 7.73684210526316 | 62 | 30 | 69.9 | 0 | 228 | 43 | 126 | 187 | GFH48322.1 phosphoglycerate mutase [Chaetoceros tenuissimus] | diamond | 2058 | 76.3 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Chaetocerotales | Chaetocerotaceae | Chaetoceros | Chaetoceros tenuissimus | ||
| 33058576 | 33058576 | PRJNA816047d_S_NODE_42757_length_332_cov_6.946237_g40922_i0 | PRJNA816047 | 42757 | 332 | 6.946237 | 23.06150684 | Cyclotella cryptica | 29204 | SAR_Eukaryotes | SAR_Eukaryotes | 65.5 | 1.07e-9 | NR | KAL3798039.1 | 29204 | g40922 | i0 | 64 | 0.451807228915663 | 50 | 18 | 45.2 | 0 | 150 | 1 | 381 | 430 | KAL3798039.1 hypothetical protein HJC23_012330 [Cyclotella cryptica] | diamond | 150 | 65.5 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Stephanodiscales | Stephanodiscaceae | Cyclotella | Cyclotella cryptica | ||
| 33092605 | 33092605 | PRJNA816047d_S_NODE_135598_length_226_cov_2.121387_g133763_i0 | PRJNA816047 | 135598 | 226 | 2.121387 | 4.79433462 | Phaeodactylum tricornutum CCAP 1 | 2850 | SAR_Eukaryotes | SAR_Eukaryotes | 84.3 | 1.89e-17 | NR | XP_002179603.1 | 556484 | g133763 | i0 | 58.6 | 0.929203539823009 | 70 | 29 | 92.9 | 0 | 17 | 226 | 65 | 134 | XP_002179603.1 coproporphyrinogen oxidase [Phaeodactylum tricornutum CCAP 1055/1] | diamond | 210 | 84.3 | 1 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Naviculales | Phaeodactylaceae | Phaeodactylum | Phaeodactylum tricornutum | ||
| 33147008 | 33147008 | PRJNA816047d_S_NODE_50503_length_311_cov_1.984496_g48668_i0 | PRJNA816047 | 50503 | 311 | 1.984496 | 6.17178256 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 48.1 | 4.3e-4 | NR | CAJ1969502.1 | 2856 | g48668 | i0 | 58.1 | 0.636655948553055 | 31 | 13 | 29.9 | 0 | 2 | 94 | 130 | 160 | CAJ1969502.1 unnamed protein product [Cylindrotheca closterium] | diamond | 198 | 48.5 | 0.991752577319588 | Eukaryota | Sar | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Cylindrotheca | Cylindrotheca closterium | ||
| 33178370 | 33178370 | PRJNA816047d_S_NODE_73304_length_269_cov_3.787037_g71469_i0 | PRJNA816047 | 73304 | 269 | 3.787037 | 10.18712953 | Thalassiosira oceanica | 159749 | SAR_Eukaryotes | SAR_Eukaryotes | 60.8 | 2.06e-8 | NR | EJK54070.1 | 159749 | g71469 | i0 | 66.7 | 0.869888475836431 | 39 | 13 | 43.5 | 0 | 2 | 118 | 378 | 416 | EJK54070.1 hypothetical protein THAOC_26379 [Thalassiosira oceanica] | diamond | 234 | 60.8 | 1 | Eukaryota | Sar | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Thalassiosiraceae | Thalassiosira | Thalassiosira oceanica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;