RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

10 rows where bioproject = "PRJNA816047" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 10 ✖

bioproject 1

  • PRJNA816047 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25908247 25908247 PRJNA816047d_S_NODE_53811_length_303_cov_11295.384000_g51976_i0 PRJNA816047 53811 303 11295.384 34225.01352 root 1 Root_unresolved Root_unresolved 71.3 7.79e-8   NTclustered gi|969874815|gb|CP013695.1| 2285 g51976 i0 100 110.471947194719 38 0 13 0 212 249 40 3 Sulfolobus acidocaldarius strain NG05B_CO5_07 chromosome blastn 33473 71.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus acidocaldarius
26013899 26013899 PRJNA816047d_S_NODE_66980_length_279_cov_2.101770_g65145_i0 PRJNA816047 66980 279 2.10177 5.8639383 Nitrososphaeria archaeon 2268198 Archaea Archaea 69.7 5.21e-12   NR MFP3282688.1 2268198 g65145 i0 47.6 0.881720430107527 82 35 88.2 2 10 255 119 192 MFP3282688.1 hypothetical protein [Nitrososphaeria archaeon] diamond 246 69.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria       Nitrososphaeria archaeon
26588646 26588646 PRJNA816047d_S_NODE_74144_length_268_cov_1.953488_g72309_i0 PRJNA816047 74144 268 1.953488 5.23534784 Candidatus Nitrosocosmicus sp. 2109671 Archaea Archaea 66.6 1.3099999999999999e-10   NR HLL61392.1 2109671 g72309 i0 49.3 0.75 67 34 75 0 266 66 84 150 HLL61392.1 DAK2 domain-containing protein [Candidatus Nitrosocosmicus sp.] diamond 201 66.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.
32921357 32921357 PRJNA816047a_S_NODE_80521_length_241_cov_0.916667_g77861_i0 PRJNA816047 80521 241 0.916667 2.20916747 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 58.2 1.29e-7   NR HSA72759.1 2169593 g77861 i0 45.8 1.46887966804979 59 32 73.4 0 21 197 433 491 HSA72759.1 reverse transcriptase family protein [Nitrososphaeraceae archaeon] diamond 354 58.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32973714 32973714 PRJNA816047d_S_NODE_79954_length_263_cov_0.923810_g78119_i0 PRJNA816047 79954 263 0.92381 2.4296203 Candidatus Methanomethylicia archaeon 2268187 Archaea Archaea 79 4.4e-17   NR MEM4483218.1 2268187 g78119 i0 65 0.684410646387833 60 20 68.4 1 261 82 22 80 MEM4483218.1 hypothetical protein [Candidatus Methanomethylicia archaeon] diamond 180 79 1 Archaea   Thermoproteati Thermoproteota Methanosuratincolia       Candidatus Methanomethylicia archaeon
33110027 33110027 PRJNA816047d_S_NODE_81198_length_262_cov_0.928230_g79363_i0 PRJNA816047 81198 262 0.92823 2.4319626 Nitrososphaera sp. 1971748 Archaea Archaea 161 1.18e-46   NR HXG07328.1 1971748 g79363 i0 89.5 0.984732824427481 86 9 98.5 0 260 3 55 140 HXG07328.1 AccI family restriction endonuclease [Nitrososphaera sp.] diamond 258 161 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
33143188 33143188 PRJNA816047a_S_NODE_53031_length_290_cov_1.354839_g50371_i0 PRJNA816047 53031 290 1.354839 3.9290331 Candidatus Korarchaeum cryptofilum 498846 Archaea Archaea 41.2 0.0492   NR WP_012310218.1 498846 g50371 i0 42.9 0.43448275862069 42 24 43.4 0 122 247 3 44 WP_012310218.1 50S ribosomal protein L14e [Candidatus Korarchaeum cryptofilum] diamond 126 41.2 1 Archaea   Thermoproteati Thermoproteota Candidatus Korarchaeia Candidatus Korarchaeales Candidatus Korarchaeaceae Candidatus Korarchaeum Candidatus Korarchaeum cryptofilum
33160643 33160643 PRJNA816047d_S_NODE_14216_length_613_cov_3267.750000_g12583_i0 PRJNA816047 14216 613 3267.75 20031.3075 Nitrososphaera sp. 1971748 Archaea Archaea 54.7 5.63e-5   NR HEV8387623.1 1971748 g12583 i0 37.9 0.32300163132137 66 40 32.3 1 261 64 39 103 HEV8387623.1 polysaccharide deacetylase family protein [Nitrososphaera sp.] diamond 198 54.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
33160973 33160973 PRJNA816047d_S_NODE_59616_length_292_cov_0.995816_g57781_i0 PRJNA816047 59616 292 0.995816 2.90778272 Candidatus Methanomethylicia archaeon 2268187 Archaea Archaea 197 3.47e-59   NR MEM4483221.1 2268187 g57781 i0 99 0.996575342465753 97 1 99.7 0 291 1 52 148 MEM4483221.1 hypothetical protein [Candidatus Methanomethylicia archaeon] diamond 291 197 1 Archaea   Thermoproteati Thermoproteota Methanosuratincolia       Candidatus Methanomethylicia archaeon
33161047 33161047 PRJNA816047d_S_NODE_72192_length_271_cov_1.555046_g70357_i0 PRJNA816047 72192 271 1.555046 4.21417466 Ignisphaera sp. 2268142 Archaea Archaea 74.3 1.9e-13   NR MCI4437878.1 2268142 g70357 i0 45.8 0.797047970479705 72 37 79.7 1 55 270 15 84 MCI4437878.1 hypothetical protein [Ignisphaera sp.] diamond 216 74.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Ignisphaera Ignisphaera sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;