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contig_metadata

29 rows where bioproject = "PRJNA816047", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 29 ✖

tax_kingdom 1

  • Pseudomonadati · 29 ✖

bioproject 1

  • PRJNA816047 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25874272 25874272 PRJNA816047d_S_NODE_16643_length_554_cov_2.163673_g14926_i0 PRJNA816047 16643 554 2.163673 11.98674842 Pseudomonadati 3379134 Bacteria Bacteria 198 2.73e-60   NR WP_012645621.1 1203471 g14926 i0 57.7 4.52707581227437 168 70 91 1 516 13 71 237 WP_012645621.1 hypothetical protein [Geotalea daltonii] diamond 2508 198 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geotalea Geotalea daltonii
25875426 25875426 PRJNA816047d_S_NODE_2979_length_4249_cov_8.394185_g1677_i1 PRJNA816047 2979 4249 8.394185 356.66892065 Syntrophaceae bacterium 2052184 Bacteria Bacteria 808 3.92e-277   NR MEN6318600.1 2052184 g1677 i1 69.6 0.814073899741116 576 175 40.7 0 62 1789 1 576 MEN6318600.1 AAA family ATPase [Syntrophaceae bacterium] diamond 3459 808 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
26000151 26000151 PRJNA816047a_S_NODE_2572_length_1717_cov_19890.618613_g493_i2 PRJNA816047 2572 1717 19890.618613 341521.92158521 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 196 1.4499999999999998e-54   NR NIS10189.1 2080303 g493 i2 58.1 0.324985439720443 186 76 32.1 2 1016 1567 1 186 NIS10189.1 transposase [Candidatus Dadabacteria bacterium] diamond 558 196 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
26138972 26138972 PRJNA816047a_S_NODE_5645_length_885_cov_12.077586_g183_i3 PRJNA816047 5645 885 12.077586 106.8866361 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 107 1.61e-23   NR NIS10189.1 2080303 g183 i3 62.8 0.31864406779661 94 34 31.9 1 356 637 81 173 NIS10189.1 transposase [Candidatus Dadabacteria bacterium] diamond 282 107 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
26273610 26273610 PRJNA816047a_S_NODE_39102_length_333_cov_1.123077_g36442_i0 PRJNA816047 39102 333 1.123077 3.73984641 Desulfuromonas sp. AOP6 1566351 Bacteria Bacteria 52.8 0.031   NTclustered gi|1847250123|dbj|AP022810.1| 1566351 g36442 i0 100 0.0840840840840841 28 0 8 0 288 315 2331254 2331227 Desulfuromonas sp. AOP6 DNA, complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp. AOP6
26282470 26282470 PRJNA816047d_S_NODE_148462_length_216_cov_4.190184_g146627_i0 PRJNA816047 148462 216 4.190184 9.05079744 Desulfosediminicola flagellatus 2569541 Bacteria Bacteria 54.7 0.005   NTclustered gi|1861338670|gb|CP050698.1| 2569541 g146627 i0 92.105 0.175925925925926 38 3 18 0 68 105 145054 145091 Desulfosediminicola flagellatus strain IMCC35005 chromosome, complete genome blastn 38 54.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfosediminicola Desulfosediminicola flagellatus
26408916 26408916 PRJNA816047a_S_NODE_3407_length_1292_cov_4773.903199_g1369_i0 PRJNA816047 3407 1292 4773.903199 61678.82933108 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 110 2.3399999999999994e-23   NR NIS10189.1 2080303 g1369 i0 36.1 1.06578947368421 230 105 43.7 3 242 805 49 278 NIS10189.1 transposase [Candidatus Dadabacteria bacterium] diamond 1377 110 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
26418340 26418340 PRJNA816047d_S_NODE_150287_length_215_cov_6.049383_g148452_i0 PRJNA816047 150287 215 6.049383 13.00617345 Desulfobacterales bacterium 2044940 Bacteria Bacteria 231 2.27e-56   NTclustered gi|2621701778|emb|OY759308.1| 2044940 g148452 i0 87.5 0.930232558139535 200 25 93 0 3 202 219824 220023 MAG: Desulfobacterales bacterium isolate 4b48c405-a8b0-44ce-a896-9916d3c4254b genome assembly, chromosome: 1 blastn 200 231 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
32925043 32925043 PRJNA816047d_S_NODE_61105_length_289_cov_2.478814_g59270_i0 PRJNA816047 61105 289 2.478814 7.16377246 FCB group 1783270 Bacteria Bacteria 50.1 9.82e-5   NR RII28106.1 46610 g59270 i0 43.8 2.38754325259516 64 31 63.3 2 194 12 1 62 RII28106.1 MAG: hypothetical protein CXR30_14730 [Geobacter sp.] diamond 690 50.4 0.994047619047619 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geobacter Geobacter sp.
32972635 32972635 PRJNA816047a_S_NODE_2594_length_1699_cov_6.198032_g745_i0 PRJNA816047 2594 1699 6.198032 105.30456368 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 161 1.7699999999999993e-41   NR NIS10189.1 2080303 g745 i0 40 0.494408475573867 280 131 45 5 854 90 11 278 NIS10189.1 transposase [Candidatus Dadabacteria bacterium] diamond 840 161 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
32973083 32973083 PRJNA816047b_S_NODE_4954_length_649_cov_1.381944_g2764_i0 PRJNA816047 4954 649 1.381944 8.96881656 Syntrophaceae bacterium 2052184 Bacteria Bacteria 297 1.18e-94   NR MEN6318600.1 2052184 g2764 i0 71.8 0.984591679506934 213 60 98.5 0 6 644 150 362 MEN6318600.1 AAA family ATPase [Syntrophaceae bacterium] diamond 639 297 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
32989759 32989759 PRJNA816047a_S_NODE_40283_length_328_cov_2.054902_g37623_i0 PRJNA816047 40283 328 2.054902 6.74007856 Syntrophaceae bacterium 2052184 Bacteria Bacteria 127 1.5499999999999998e-31   NR MEN6318600.1 2052184 g37623 i0 59.8 0.841463414634146 92 37 84.1 0 276 1 468 559 MEN6318600.1 AAA family ATPase [Syntrophaceae bacterium] diamond 276 127 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
32990658 32990658 PRJNA816047d_S_NODE_52771_length_306_cov_1.371542_g50936_i0 PRJNA816047 52771 306 1.371542 4.19691852 Desulfobacterales bacterium HSG2 3055596 Bacteria Bacteria 42.4 0.0135   NR MDM8548909.1 3055596 g50936 i0 54.3 1.52941176470588 35 16 34.3 0 299 195 3 37 MDM8548909.1 hypothetical protein [Desulfobacterales bacterium HSG2] diamond 468 42.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium HSG2
33057773 33057773 PRJNA816047a_S_NODE_2301_length_1966_cov_11.869519_g493_i1 PRJNA816047 2301 1966 11.869519 233.35474354 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 236 9.45e-69   NR NIS10189.1 2080303 g493 i1 58.4 0.334181078331638 219 89 33.1 2 1016 1666 1 219 NIS10189.1 transposase [Candidatus Dadabacteria bacterium] diamond 657 236 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
33061450 33061450 PRJNA816047a_S_NODE_69125_length_256_cov_0.989071_g66465_i0 PRJNA816047 69125 256 0.989071 2.53202176 Bacteria 2 Bacteria Bacteria 43.5 0.0197   NR HOE16293.1 2660714 g66465 i0 38.1 1.359375 63 33 68 2 48 221 87 148 HOE16293.1 DUF1460 domain-containing protein [Syntrophorhabdaceae bacterium] diamond 348 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae   Syntrophorhabdaceae bacterium
33061690 33061690 PRJNA816047d_S_NODE_74061_length_268_cov_2.655814_g72226_i0 PRJNA816047 74061 268 2.655814 7.11758152 Pseudomonadati 3379134 Bacteria Bacteria 62 6.05e-9   NR HOP40762.1 2282154 g72226 i0 51.9 2.09328358208955 54 26 60.4 0 172 11 29 82 HOP40762.1 3'-5' exonuclease [Geobacteraceae bacterium] diamond 561 62 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium
33074749 33074749 PRJNA816047a_S_NODE_15757_length_509_cov_2.935780_g13131_i0 PRJNA816047 15757 509 2.93578 14.9431202 Syntrophaceae bacterium 2052184 Bacteria Bacteria 229 3.41e-69   NR MEN6318600.1 2052184 g13131 i0 69.2 0.996070726915521 169 52 99.6 0 508 2 252 420 MEN6318600.1 AAA family ATPase [Syntrophaceae bacterium] diamond 507 229 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
33075838 33075838 PRJNA816047d_S_NODE_75517_length_266_cov_2.046948_g73682_i0 PRJNA816047 75517 266 2.046948 5.44488168 Desulfovibrio sp. 6_1_46AFAA 665942 Bacteria Bacteria 134 1.96e-35   NR WP_009303299.1 665942 g73682 i0 72.7 1.98496240601504 88 24 99.2 0 264 1 21 108 WP_009303299.1 hypothetical protein [Desulfovibrio sp. 6_1_46AFAA] diamond 528 134 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp. 6_1_46AFAA
33091969 33091969 PRJNA816047a_S_NODE_1422_length_3786_cov_8.796660_g183_i0 PRJNA816047 1422 3786 8.79666 333.0415476 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 107 1.61e-21   NR NIS10189.1 2080303 g183 i0 62.8 0.0744849445324881 94 34 7.4 1 530 249 81 173 NIS10189.1 transposase [Candidatus Dadabacteria bacterium] diamond 282 107 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
33092278 33092278 PRJNA816047a_S_NODE_88838_length_205_cov_12.840909_g86178_i0 PRJNA816047 88838 205 12.840909 26.32386345 Geopsychrobacteraceae bacterium 3065857 Bacteria Bacteria 42 0.0412   NR HEX9777256.1 3065857 g86178 i0 44.1 0.863414634146341 59 25 84.9 3 3 176 407 458 HEX9777256.1 mycofactocin biosynthesis glycosyltransferase MftF [Geopsychrobacteraceae bacterium] diamond 177 42 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geopsychrobacteraceae   Geopsychrobacteraceae bacterium
33092707 33092707 PRJNA816047d_S_NODE_26566_length_415_cov_1.372928_g24736_i0 PRJNA816047 26566 415 1.372928 5.6976512 Desulfobaccales bacterium 3064668 Bacteria Bacteria 50.4 2.45e-4   NR HEY9073149.1 3064668 g24736 i0 46 0.36144578313253 50 27 36.1 0 161 12 1 50 HEY9073149.1 50S ribosomal protein L4 [Desulfobaccales bacterium] diamond 150 50.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobaccia Desulfobaccales     Desulfobaccales bacterium
33109168 33109168 PRJNA816047a_S_NODE_7030_length_773_cov_4.065714_g4622_i0 PRJNA816047 7030 773 4.065714 31.42796922 Malonomonas rubra 57040 Bacteria Bacteria 129 5.36e-30   NR WP_072905593.1 57040 g4622 i0 58.3 9.7490297542044 120 48 46.6 1 413 772 7 124 WP_072905593.1 UvrD-helicase domain-containing protein [Malonomonas rubra] diamond 7536 129 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Geopsychrobacteraceae Malonomonas Malonomonas rubra
33126219 33126219 PRJNA816047a_S_NODE_62007_length_269_cov_1.668367_g59347_i0 PRJNA816047 62007 269 1.668367 4.48790723 Syntrophales bacterium 2928017 Bacteria Bacteria 43.5 0.0267   NR MCK9364639.1 2928017 g59347 i0 41.2 0.568773234200744 51 26 56.9 1 182 30 98 144 MCK9364639.1 diguanylate cyclase [Syntrophales bacterium] diamond 153 43.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
33160124 33160124 PRJNA816047a_S_NODE_44704_length_312_cov_2.736402_g42044_i0 PRJNA816047 44704 312 2.736402 8.53757424 Desulfovibrionaceae bacterium 2049043 Bacteria Bacteria 120 2.15e-31   NR MCL1960287.1 2049043 g42044 i0 51.5 1.98076923076923 103 50 99 0 311 3 72 174 MCL1960287.1 AGE family epimerase/isomerase [Desulfovibrionaceae bacterium] diamond 618 120 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae   Desulfovibrionaceae bacterium
33160263 33160263 PRJNA816047a_S_NODE_76128_length_246_cov_0.890173_g73468_i0 PRJNA816047 76128 246 0.890173 2.18982558 Syntrophaceae bacterium 2052184 Bacteria Bacteria 97.8 1.25e-21   NR MEN6318599.1 2052184 g73468 i0 87.3 2 55 7 67.1 0 3 167 428 482 MEN6318599.1 UvrD-helicase domain-containing protein [Syntrophaceae bacterium] diamond 492 97.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae   Syntrophaceae bacterium
33160854 33160854 PRJNA816047d_S_NODE_39592_length_343_cov_1.368966_g37757_i0 PRJNA816047 39592 343 1.368966 4.69555338 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 62 1.8e-8   NR MEW6531472.1 2202153 g37757 i0 55.4 0.489795918367347 56 25 49 0 329 162 314 369 MEW6531472.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 168 62 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
33163883 33163883 PRJNA816047d_S_NODE_105408_length_248_cov_0.923077_g103573_i0 PRJNA816047 105408 248 0.923077 2.28923096 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 84.7 6.56e-17   NR WP_051305209.1 160661 g103573 i0 54.4 7.64516129032258 79 35 94.4 1 6 239 181 259 WP_051305209.1 glycosyltransferase family 2 protein [Desulfogranum mediterraneum] diamond 1896 85.1 0.995299647473561 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfogranum Desulfogranum mediterraneum
33163969 33163969 PRJNA816047d_S_NODE_43688_length_329_cov_6.416667_g41853_i0 PRJNA816047 43688 329 6.416667 21.11083443 Bacteria 2 Bacteria Bacteria 150 7.17e-41   NR WP_207680805.1 45655 g41853 i0 68.9 1.93313069908815 106 33 96.7 0 3 320 66 171 WP_207680805.1 ATP-binding protein [Desulfonema magnum] diamond 636 150 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfonema Desulfonema magnum
33163998 33163998 PRJNA816047d_S_NODE_62920_length_286_cov_1.690987_g61085_i0 PRJNA816047 62920 286 1.690987 4.83622282 Bacteria 2 Bacteria Bacteria 73.9 4.98e-13   NR WP_205232960.1 468528 g61085 i0 68.6 1.67832167832168 51 16 53.5 0 164 12 1 51 WP_205232960.1 ATP-binding cassette domain-containing protein [Desulfopila inferna] diamond 480 73.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfopila Desulfopila inferna

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;