RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA816047", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Sysuimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sysuimicrobiota · 1 ✖

tax_kingdom 1

  • Bacillati · 1 ✖

bioproject 1

  • PRJNA816047 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33092793 33092793 PRJNA816047d_S_NODE_36822_length_354_cov_1.332226_g34987_i0 PRJNA816047 36822 354 1.332226 4.71608004 Bacillati bacterium ANGP1 2569760 Bacteria Bacteria 182 1.89e-50   NR TMI91833.1 2569760 g34987 i0 80.3 1.98305084745763 117 23 99.2 0 352 2 670 786 TMI91833.1 MAG: efflux RND transporter permease subunit [Bacillati bacterium ANGP1] diamond 702 182 1 Bacteria   Bacillati Candidatus Sysuimicrobiota Candidatus Sysuimicrobiia Candidatus Sysuimicrobiales Candidatus Segetimicrobiaceae Candidatus Segetimicrobium Candidatus Segetimicrobium genomatis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;