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contig_metadata

25 rows where bioproject = "PRJNA816047", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 25 ✖

tax_clade 1

  • Sar · 25 ✖

bioproject 1

  • PRJNA816047 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25601505 25601505 PRJNA816047d_S_NODE_127913_length_233_cov_2.555556_g126078_i0 PRJNA816047 127913 233 2.555556 5.95444548 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 82.4 2.66e-11   NTclustered gi|669162729|ref|XM_008618705.1| 1156394 g126078 i0 80.18 1.56223175965665 111 20 47 2 124 233 366 257 Saprolegnia diclina VS20 60S ribosomal protein L44 mRNA blastn 364 82.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
25742566 25742566 PRJNA816047d_S_NODE_85202_length_259_cov_1.291262_g83367_i0 PRJNA816047 85202 259 1.291262 3.34436858 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 183 8.02e-42   NTclustered gi|695382201|ref|XM_009519030.1| 67593 g83367 i0 82.843 16.992277992278 204 35 79 0 6 209 86 289 Phytophthora sojae hypothetical protein mRNA blastn 4401 183 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
26005354 26005354 PRJNA816047b_S_NODE_13388_length_423_cov_12635.017143_g11082_i0 PRJNA816047 13388 423 12635.017143 53446.12251489 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 134 2.02e-36   NR RHY33137.1 157072 g11082 i0 82.9 1.16312056737589 82 14 58.2 0 71 316 120 201 RHY33137.1 hypothetical protein DYB32_001820, partial [Aphanomyces invadans] diamond 492 134 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
26179490 26179490 PRJNA816047d_S_NODE_110789_length_245_cov_1.171875_g108954_i0 PRJNA816047 110789 245 1.171875 2.87109375 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 107 7.57e-25   NR TMW56879.1 41045 g108954 i0 60 2.93877551020408 80 32 98 0 242 3 197 276 TMW56879.1 hypothetical protein Poli38472_006889 [Pythium oligandrum] diamond 720 108 0.990740740740741 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
26283834 26283834 PRJNA816047d_S_NODE_28486_length_399_cov_3.973988_g26654_i0 PRJNA816047 28486 399 3.973988 15.85621212 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 167 1.31e-36   NTclustered gi|2795048880|ref|XM_067943659.1| 4785 g26654 i0 77.431 4.98245614035088 288 60 71 4 24 307 153 439 Phytophthora cinnamomi Calmodulin (IUM83_18649), partial mRNA blastn 1988 167 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
26421399 26421399 PRJNA816047d_S_NODE_58191_length_294_cov_4.651452_g56356_i0 PRJNA816047 58191 294 4.651452 13.67526888 Phytophthora fragariaefolia 1490495 SAR_Eukaryotes SAR_Eukaryotes 95.5 2.4e-21   NR GMF45944.1 1490495 g56356 i0 47.2 1.81632653061224 89 47 90.8 0 286 20 168 256 GMF45944.1 unnamed protein product [Phytophthora fragariaefolia] diamond 534 95.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariaefolia
26551815 26551815 PRJNA816047b_S_NODE_41856_length_264_cov_3.277487_g39544_i0 PRJNA816047 41856 264 3.277487 8.65256568 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 202 2.26e-47   NTclustered gi|698783094|ref|XM_009826289.1| 112090 g39544 i0 91.216 43.844696969697 148 13 56 0 117 264 498 351 Aphanomyces astaci 40S ribosomal protein S23 mRNA blastn 11575 202 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
26559028 26559028 PRJNA816047d_S_NODE_94848_length_253_cov_1.810000_g93013_i0 PRJNA816047 94848 253 1.81 4.5793 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 176 1.31e-39   NTclustered gi|59894163|gb|AY729864.1| 74557 g93013 i0 80.342 52.4110671936759 234 44 92 2 1 233 1277 1045 Thraustotheca clavata heat shock protein 90 gene, partial cds blastn 13260 176 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
32922187 32922187 PRJNA816047d_S_NODE_92049_length_255_cov_0.960396_g90214_i0 PRJNA816047 92049 255 0.960396 2.4490098 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 60.1 3.15e-8   NR OQR91227.1 74557 g90214 i0 34.7 3.54117647058824 75 47 85.9 1 251 33 165 239 OQR91227.1 hypothetical protein THRCLA_22482 [Thraustotheca clavata] diamond 903 60.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
32942241 32942241 PRJNA816047d_S_NODE_45569_length_324_cov_1.387454_g43734_i0 PRJNA816047 45569 324 1.387454 4.49535096 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.4 4.16e-5   NR DAZ95523.1 4803 g43734 i0 39.3 2.59259259259259 89 54 82.4 0 58 324 937 1025 DAZ95523.1 TPA: hypothetical protein N0F65_001862 [Lagenidium giganteum] diamond 840 52.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
32990283 32990283 PRJNA816047d_S_NODE_114955_length_243_cov_2.247368_g113120_i0 PRJNA816047 114955 243 2.247368 5.46110424 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 48.1 2e-4   NR KAG9402244.1 112091 g113120 i0 44.4 1.17283950617284 45 25 55.6 0 59 193 101 145 KAG9402244.1 hypothetical protein AC1031_006867 [Aphanomyces cochlioides] diamond 285 48.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
32990641 32990641 PRJNA816047d_S_NODE_49211_length_314_cov_2.272031_g47376_i0 PRJNA816047 49211 314 2.272031 7.13417734 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 53.1 1.79e-5   NR TYZ60679.1 1485010 g47376 i0 33.7 1.73885350318471 98 59 91.7 2 312 25 217 310 TYZ60679.1 hypothetical protein PybrP1_012107 [[Pythium] brassicae (nom. inval.)] diamond 546 53.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
32993456 32993456 PRJNA816047d_S_NODE_29283_length_394_cov_1.099707_g27451_i0 PRJNA816047 29283 394 1.099707 4.33284558 root 1 Root_unresolved Root_unresolved 70.1 3.38e-11   NR OWZ08818.1 4795 g27451 i0 44.4 2.95431472081218 81 39 61.7 1 2 244 241 315 OWZ08818.1 YjeF family domain-containing hypothetical protein [Phytophthora megakarya] diamond 1164 70.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
33007174 33007174 PRJNA816047d_S_NODE_131067_length_230_cov_2.186441_g129232_i0 PRJNA816047 131067 230 2.186441 5.0288143 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 59.3 4.48e-8   NR CCI50533.1 65357 g129232 i0 56.3 1.25217391304348 48 21 62.6 0 2 145 206 253 CCI50533.1 unnamed protein product [Albugo candida] diamond 288 59.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
33010519 33010519 PRJNA816047d_S_NODE_32323_length_375_cov_3.807453_g30489_i0 PRJNA816047 32323 375 3.807453 14.27794875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 132 4.609999999999999e-37   NR KAF0738771.1 100861 g30489 i0 67.3 15.832 104 34 83.2 0 341 30 18 121 KAF0738771.1 hypothetical protein Ae201684_005384 [Aphanomyces euteiches] diamond 5937 133 0.992481203007519 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
33024290 33024290 PRJNA816047d_S_NODE_112852_length_244_cov_1.481675_g111017_i0 PRJNA816047 112852 244 1.481675 3.615287 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 62.4 4.51e-9   NR XP_024581478.1 4781 g111017 i0 62.5 2.8155737704918 48 18 59 0 1 144 607 654 XP_024581478.1 aspartate aminotransferase [Plasmopara halstedii] diamond 687 62.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
33024469 33024469 PRJNA816047d_S_NODE_23764_length_442_cov_2.269923_g21937_i0 PRJNA816047 23764 442 2.269923 10.03305966 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 84.7 5.73e-16   NR KAJ8578277.1 4785 g21937 i0 40 1.35746606334842 100 60 67.9 0 138 437 172 271 KAJ8578277.1 hypothetical protein ON010_g926 [Phytophthora cinnamomi] diamond 600 84.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
33027660 33027660 PRJNA816047d_S_NODE_67860_length_278_cov_0.777778_g66025_i0 PRJNA816047 67860 278 0.777778 2.16222284 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 65.1 6.6e-11   NR KAJ0402934.1 114742 g66025 i0 58.3 34.1870503597122 72 30 77.7 0 2 217 15 86 KAJ0402934.1 hypothetical protein P43SY_005919 [Pythium insidiosum] diamond 9504 65.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
33044450 33044450 PRJNA816047a_S_NODE_36404_length_344_cov_2.778598_g33744_i0 PRJNA816047 36404 344 2.778598 9.55837712 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 49.7 4.4e-4   NR KAE8877845.1 53985 g33744 i0 33.8 8.66860465116279 71 47 61.9 0 343 131 521 591 KAE8877845.1 hypothetical protein PF003_g37962 [Phytophthora fragariae] diamond 2982 50.1 0.992015968063872 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
33075334 33075334 PRJNA816047d_S_NODE_117829_length_242_cov_1.037037_g115994_i0 PRJNA816047 117829 242 1.037037 2.50962954 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 62.8 3.14e-9   NR XP_009844354.1 112090 g115994 i0 65.5 1.5495867768595 58 20 71.9 0 66 239 5 62 XP_009844354.1 hypothetical protein H257_17317 [Aphanomyces astaci] diamond 375 62.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
33095875 33095875 PRJNA816047d_S_NODE_50910_length_310_cov_2.035019_g49075_i0 PRJNA816047 50910 310 2.035019 6.3085589 root 1 Root_unresolved Root_unresolved 108 4.11e-25   NR KUF98307.1 4792 g49075 i0 59.3 7.04516129032258 91 37 88.1 0 3 275 424 514 KUF98307.1 hypothetical protein AM588_10009698 [Phytophthora nicotianae] diamond 2184 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
33109074 33109074 PRJNA816047a_S_NODE_50246_length_296_cov_1.349776_g47586_i0 PRJNA816047 50246 296 1.349776 3.99533696 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 103 2.7899999999999998e-24   NR XP_012209282.1 695850 g47586 i0 60.5 0.820945945945946 81 31 82.1 1 294 52 243 322 XP_012209282.1 hypothetical protein SPRG_21383 [Saprolegnia parasitica CBS 223.65] diamond 243 103 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
33112593 33112593 PRJNA816047a_S_NODE_3446_length_1281_cov_6.931291_g1401_i0 PRJNA816047 3446 1281 6.931291 88.78983771 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 49.3 0.034   NR KAH9095265.1 100861 g1401 i0 52.5 0.201405152224824 40 19 9.4 0 290 409 10 49 KAH9095265.1 hypothetical protein Ae201684P_013381 [Aphanomyces euteiches] diamond 258 49.7 0.991951710261569 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
33126441 33126441 PRJNA816047b_S_NODE_36383_length_281_cov_1.365385_g34071_i0 PRJNA816047 36383 281 1.365385 3.83673185 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 149 1.6799999999999999e-40   NR KAF0732286.1 100861 g34071 i0 94.6 2.37010676156584 74 4 79 0 279 58 393 466 KAF0732286.1 hypothetical protein Ae201684_010577 [Aphanomyces euteiches] diamond 666 149 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
33164033 33164033 PRJNA816047d_S_NODE_88432_length_257_cov_1.176471_g86597_i0 PRJNA816047 88432 257 1.176471 3.02353047 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 50.4 8.87e-5   NR KUG01027.1 4792 g86597 i0 41.3 4.66926070038911 63 36 73.5 1 257 69 3678 3739 KUG01027.1 E3 ubiquitin-protein ligase HERC2 [Phytophthora nicotianae] diamond 1200 50.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;