RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA816047", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA816047 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32938454 32938454 PRJNA816047a_S_NODE_65961_length_261_cov_2.755319_g63301_i0 PRJNA816047 65961 261 2.755319 7.19138259 Nitrospinaceae bacterium 2358456 Bacteria Bacteria 64.7 2.89e-10   NR HIL27594.1 2358456 g63301 i0 35 1.94252873563218 80 52 92 0 16 255 54 133 HIL27594.1 hypothetical protein [Nitrospinaceae bacterium] diamond 507 64.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae   Nitrospinaceae bacterium
33027473 33027473 PRJNA816047a_S_NODE_60180_length_273_cov_1.285000_g57520_i0 PRJNA816047 60180 273 1.285 3.50805 Pseudomonadati 3379134 Bacteria Bacteria 46.6 0.00237   NR OGW12573.1 1801687 g57520 i0 38.3 1.27472527472527 60 35 63.7 1 100 273 393 452 OGW12573.1 MAG: hypothetical protein A3G93_00350 [Nitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22] diamond 348 46.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;