RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA816047", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 9 ✖

tax_clade 1

  • Discoba · 9 ✖

bioproject 1

  • PRJNA816047 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25731237 25731237 PRJNA816047a_S_NODE_63474_length_266_cov_1.943005_g60814_i0 PRJNA816047 63474 266 1.943005 5.1683933 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 396 9.759999999999997e-106   NTclustered gi|290969751|ref|XM_002667899.1| 5762 g60814 i0 96.667 28.6691729323308 240 5 89 3 1 238 191 429 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55041), partial mRNA blastn 7626 396 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
26417143 26417143 PRJNA816047d_S_NODE_104351_length_248_cov_1.323077_g102516_i0 PRJNA816047 104351 248 1.323077 3.28123096 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 414 2.48e-111   NTclustered gi|290969751|ref|XM_002667899.1| 5762 g102516 i0 96.774 16.3951612903226 248 8 100 0 1 248 42 289 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55041), partial mRNA blastn 4066 414 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32938479 32938479 PRJNA816047a_S_NODE_69297_length_255_cov_3.560440_g66637_i0 PRJNA816047 69297 255 3.56044 9.079122 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 116 6.200000000000001e-28   NR XP_002675230.1 5762 g66637 i0 70.1 0.905882352941176 77 22 89.4 1 4 231 806 882 XP_002675230.1 cell cycle switch protein [Naegleria gruberi] diamond 231 116 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32939108 32939108 PRJNA816047d_S_NODE_40769_length_339_cov_1.328671_g38934_i0 PRJNA816047 40769 339 1.328671 4.50419469 Acrasis kona 1008807 Heterolobosea other_Eukaryota 63.5 4.81e-10   NR KAL0487907.1 1008807 g38934 i0 48.6 0.63716814159292 72 36 62.8 1 1 213 64 135 KAL0487907.1 hypothetical protein AKO1_008896 [Acrasis kona] diamond 216 63.5 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32973760 32973760 PRJNA816047d_S_NODE_90114_length_256_cov_1.083744_g88279_i0 PRJNA816047 90114 256 1.083744 2.77438464 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 48.1 5.54e-4   NR XP_044544404.1 51637 g88279 i0 30.2 1.0078125 86 52 91.4 2 2 235 129 214 XP_044544404.1 uncharacterized protein C9374_009853 [Naegleria lovaniensis] diamond 258 48.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
33007695 33007695 PRJNA816047d_S_NODE_84251_length_260_cov_0.937198_g82416_i0 PRJNA816047 84251 260 0.937198 2.4367148 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 43.9 0.016   NR XP_044545687.1 51637 g82416 i0 66.7 0.680769230769231 27 9 31.2 0 2 82 234 260 XP_044545687.1 uncharacterized protein C9374_008312 [Naegleria lovaniensis] diamond 177 43.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
33041684 33041684 PRJNA816047d_S_NODE_58268_length_294_cov_2.531120_g56433_i0 PRJNA816047 58268 294 2.53112 7.4414928 Acrasis kona 1008807 Heterolobosea other_Eukaryota 72.8 1.03e-12   NR KAL0491511.1 1008807 g56433 i0 71.1 0.459183673469388 45 13 45.9 0 293 159 260 304 KAL0491511.1 hypothetical protein AKO1_004011 [Acrasis kona] diamond 135 72.8 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
33061684 33061684 PRJNA816047d_S_NODE_70957_length_273_cov_1.204545_g69122_i0 PRJNA816047 70957 273 1.204545 3.28840785 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.6 1.56e-13   NR XP_044555759.1 51637 g69122 i0 64.7 16.9450549450549 51 18 56 0 20 172 26 76 XP_044555759.1 uncharacterized protein C9374_003629 [Naegleria lovaniensis] diamond 4626 74.3 0.990578734858681 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
33075341 33075341 PRJNA816047d_S_NODE_120165_length_241_cov_1.159574_g118330_i0 PRJNA816047 120165 241 1.159574 2.79457334 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 108 2.43e-25   NR XP_044553835.1 51637 g118330 i0 55.7 0.983402489626556 79 35 98.3 0 239 3 751 829 XP_044553835.1 uncharacterized protein C9374_013426 [Naegleria lovaniensis] diamond 237 108 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;