RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA816047" and tax_clade = "Candidatus Porisulfidus"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Porisulfidus · 2 ✖

bioproject 1

  • PRJNA816047 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26002608 26002608 PRJNA816047a_S_NODE_5396_length_910_cov_5.956989_g3106_i0 PRJNA816047 5396 910 5.956989 54.2085999 uncultured candidatus Porisulfidus sp. 3039487 Bacteria Bacteria 82.4 1.17e-10   NTclustered gi|2626255597|emb|OY843752.1| 3039487 g3106 i0 87.671 0.238461538461538 73 6 8 3 791 861 1825505 1825434 MAG: uncultured candidatus Porisulfidus sp. isolate e629978e-7072-48df-9c22-0ee86b3b6d73 genome assembly, chromosome: 1 blastn 217 82.4 1 Bacteria Candidatus Porisulfidus Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales     uncultured candidatus Porisulfidus sp.
26543753 26543753 PRJNA816047a_S_NODE_18344_length_471_cov_3.964824_g15701_i0 PRJNA816047 18344 471 3.964824 18.67432104 uncultured candidatus Porisulfidus sp. 3039487 Bacteria Bacteria 82.4 5.84e-11   NTclustered gi|2626255597|emb|OY843752.1| 3039487 g15701 i0 87.671 0.520169851380042 73 6 15 3 50 120 1825434 1825505 MAG: uncultured candidatus Porisulfidus sp. isolate e629978e-7072-48df-9c22-0ee86b3b6d73 genome assembly, chromosome: 1 blastn 245 82.4 1 Bacteria Candidatus Porisulfidus Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales     uncultured candidatus Porisulfidus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;