RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA816047", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA816047 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26545349 26545349 PRJNA816047a_S_NODE_3608_length_1231_cov_5112.788428_g1532_i0 PRJNA816047 3608 1231 5112.788428 62938.42554868 Bacteria 2 Bacteria Bacteria 93.2 4.09e-17   NR OGD22126.1 1797268 g1532 i0 34.6 3.4825345247766 130 85 31.7 0 587 976 160 289 OGD22126.1 MAG: hypothetical protein A2Y69_04310 [Candidatus Aminicenantes bacterium RBG_13_59_9] diamond 4287 93.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium RBG_13_59_9
26549145 26549145 PRJNA816047a_S_NODE_8552_length_694_cov_5.156200_g6067_i0 PRJNA816047 8552 694 5.1562 35.784028 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 106 5.24e-18   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g6067 i0 88.636 14.8703170028818 88 8 12 2 301 386 8929509 8929422 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 10320 106 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;