RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA816047", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA816047 · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25740726 25740726 PRJNA816047d_S_NODE_48962_length_315_cov_1.202290_g47127_i0 PRJNA816047 48962 315 1.20229 3.7872135 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 132 3.68e-26   NTclustered gi|923137608|ref|XM_013906815.1| 461836 g47127 i0 86.667 3.5015873015873 120 14 38 2 23 141 477 595 Thecamonas trahens ATCC 50062 NADH dehydrogenase iron-sulfur protein 8 (AMSG_01097), mRNA blastn 1103 132 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32990719 32990719 PRJNA816047d_S_NODE_63963_length_284_cov_3.047619_g62128_i0 PRJNA816047 63963 284 3.047619 8.65523796 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 65.1 1.76e-10   NR XP_013760112.1 461836 g62128 i0 52.8 0.559859154929577 53 25 56 0 3 161 133 185 XP_013760112.1 GTP-binding protein rhb1 [Thecamonas trahens ATCC 50062] diamond 159 65.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;