contig_metadata
6 rows where bioproject = "PRJNA816047", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25872712 | 25872712 | PRJNA816047d_S_NODE_100491_length_250_cov_1.203046_g98656_i0 | PRJNA816047 | 100491 | 250 | 1.203046 | 3.007615 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 274 | 4.44e-69 | NTclustered | gi|1042160949|dbj|LC102281.1| | 931554 | g98656 | i0 | 86.454 | 1.784 | 251 | 32 | 100 | 2 | 1 | 250 | 453 | 702 | Copromyxa protea gene for elongation factor 2 alpha, partial cds, strain: LUM | blastn | 446 | 274 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 25873063 | 25873063 | PRJNA816047d_S_NODE_11411_length_718_cov_5.147368_g9916_i0 | PRJNA816047 | 11411 | 718 | 5.147368 | 36.95810224 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 749 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g9916 | i0 | 91.155 | 1.51810584958217 | 554 | 45 | 77 | 4 | 153 | 704 | 1389 | 838 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 1090 | 749 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 25875306 | 25875306 | PRJNA816047d_S_NODE_27971_length_403_cov_3.114286_g26140_i0 | PRJNA816047 | 27971 | 403 | 3.114286 | 12.55057258 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 209 | 2.17e-49 | NTclustered | gi|2654140|gb|AF034789.1|AF034789 | 5775 | g26140 | i0 | 84.434 | 65.4168734491315 | 212 | 33 | 74 | 0 | 1 | 212 | 232 | 443 | Amoeba proteus polyubiquitin mRNA, complete cds | blastn | 26363 | 209 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 26145773 | 26145773 | PRJNA816047d_S_NODE_122853_length_239_cov_2.677419_g121018_i0 | PRJNA816047 | 122853 | 239 | 2.677419 | 6.39903141 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 320 | 5.33e-83 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g121018 | i0 | 90.795 | 20.0292887029289 | 239 | 22 | 100 | 0 | 1 | 239 | 293 | 55 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 4787 | 320 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 26147741 | 26147741 | PRJNA816047d_S_NODE_27405_length_408_cov_0.954930_g25575_i0 | PRJNA816047 | 27405 | 408 | 0.95493 | 3.8961144 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 242 | 9.29e-77 | NR | AAP88974.1 | 5775 | g25575 | i0 | 88.8 | 0.985294117647059 | 134 | 15 | 98.5 | 0 | 407 | 6 | 234 | 367 | AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] | diamond | 402 | 242 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 26281197 | 26281197 | PRJNA816047d_S_NODE_100310_length_250_cov_1.527919_g98475_i0 | PRJNA816047 | 100310 | 250 | 1.527919 | 3.8197975 | Hartmannella cantabrigiensis | 239731 | Tubulinea | other_Eukaryota | 274 | 4.44e-69 | NTclustered | gi|1042160937|dbj|LC102275.1| | 239731 | g98475 | i0 | 95.858 | 58.98 | 169 | 7 | 68 | 0 | 68 | 236 | 787 | 619 | Hartmannella cantabrigiensis gene for actin, partial cds, strain: ALC3_cl1 | blastn | 14745 | 274 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;