contig_metadata
12 rows where bioproject = "PRJNA815356" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 819150 | 819150 | PRJNA815356_P_NODE_8801_length_253_cov_0.866667_g8638_i0 | PRJNA815356 | 8801 | 253 | 0.866667 | 2.19266751 | Canis lupus | 9612 | Chordata | Chordata | 468 | 1.92e-127 | NTclustered | gi|2272660176|ref|XM_049109386.1| | 286419 | g8638 | i0 | 100 | 83.6086956521739 | 253 | 0 | 100 | 0 | 1 | 253 | 4079 | 3827 | PREDICTED: Canis lupus dingo retinoic acid induced 14 (RAI14), transcript variant X12, mRNA | blastn | 21153 | 468 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 5922383 | 5922383 | PRJNA815356_P_NODE_9685_length_248_cov_0.891429_g9522_i0 | PRJNA815356 | 9685 | 248 | 0.891429 | 2.21074392 | Mus musculus | 10090 | Chordata | Chordata | 99 | 2.84e-16 | NTclustered | gi|51854671|gb|AC147558.3| | 10090 | g9522 | i0 | 86.667 | 0.838709677419355 | 90 | 11 | 36 | 1 | 1 | 90 | 101371 | 101459 | Mus musculus BAC clone RP23-470N2 from 8, complete sequence | blastn | 208 | 99 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7197323 | 7197323 | PRJNA815356_P_NODE_7966_length_263_cov_2.205263_g7803_i0 | PRJNA815356 | 7966 | 263 | 2.205263 | 5.79984169 | Mus musculus | 10090 | Chordata | Chordata | 56.5 | 0.002 | NTclustered | gi|23338374|emb|AL929181.2| | 10090 | g7803 | i0 | 100 | 0.114068441064639 | 30 | 0 | 11 | 0 | 171 | 200 | 79642 | 79671 | Mouse DNA sequence from clone RP23-391E20 on chromosome 4, complete sequence | blastn | 30 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8880919 | 8880919 | PRJNA815356_P_NODE_10287_length_244_cov_1.368421_g10124_i0 | PRJNA815356 | 10287 | 244 | 1.368421 | 3.33894724 | Canidae | 9608 | Chordata | Chordata | 204 | 5.74e-48 | NTclustered | gi|1953375484|ref|XM_038447175.1| | 9615 | g10124 | i0 | 100 | 45.0819672131148 | 110 | 0 | 45 | 0 | 1 | 110 | 2719 | 2828 | PREDICTED: Canis lupus familiaris oxysterol binding protein like 6 (OSBPL6), transcript variant X7, mRNA | blastn | 11000 | 204 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 15255925 | 15255925 | PRJNA815356_P_NODE_5112_length_316_cov_1.283951_g4949_i0 | PRJNA815356 | 5112 | 316 | 1.283951 | 4.05728516 | Emydidae | 8476 | Chordata | Chordata | 52.8 | 0.03 | NTclustered | gi|2739753839|ref|XM_065556230.1| | 8478 | g4949 | i0 | 100 | 2.3037974683544298 | 28 | 0 | 9 | 0 | 3 | 30 | 127 | 100 | PREDICTED: Chrysemys picta bellii EPH receptor B1 (EPHB1), transcript variant X6, mRNA | blastn | 728 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Testudines | Emydidae | Chrysemys | Chrysemys picta | ||
| 15255943 | 15255943 | PRJNA815356_P_NODE_9812_length_247_cov_0.896552_g9649_i0 | PRJNA815356 | 9812 | 247 | 0.896552 | 2.21448344 | Canis | 9611 | Chordata | Chordata | 457 | 4.05e-124 | NTclustered | gi|1953404921|ref|XR_005430416.1| | 9615 | g9649 | i0 | 100 | 7 | 247 | 0 | 100 | 0 | 1 | 247 | 2761 | 2515 | PREDICTED: Canis lupus familiaris uncharacterized LOC102152901 (LOC102152901), transcript variant X2, ncRNA | blastn | 1729 | 457 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 16121753 | 16121753 | PRJNA815356_P_NODE_6073_length_295_cov_1.319820_g5910_i0 | PRJNA815356 | 6073 | 295 | 1.31982 | 3.893469 | Chaetura pelagica | 8897 | Chordata | Chordata | 54.7 | 0.008 | NTclustered | gi|701429242|ref|XM_010005056.1| | 8897 | g5910 | i0 | 90.476 | 0.284745762711864 | 42 | 2 | 14 | 2 | 194 | 234 | 3508 | 3468 | PREDICTED: Chaetura pelagica uncharacterized LOC104395367 (LOC104395367), mRNA | blastn | 84 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Apodiformes | Apodidae | Chaetura | Chaetura pelagica | |
| 22905442 | 22905442 | PRJNA815356_P_NODE_9398_length_249_cov_1.903409_g9235_i0 | PRJNA815356 | 9398 | 249 | 1.903409 | 4.73948841 | Cheloniidae | 8465 | Chordata | Chordata | 52.8 | 0.023 | NTclustered | gi|2911499468|emb|OZ223605.1| | 8472 | g9235 | i0 | 100 | 0.674698795180723 | 28 | 0 | 11 | 0 | 222 | 249 | 4383351 | 4383324 | Lepidochelys kempii isolate rLepKem1 genome assembly, chromosome: 19 | blastn | 168 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Testudines | Cheloniidae | Lepidochelys | Lepidochelys kempii | ||
| 25045396 | 25045396 | PRJNA815356_P_NODE_10020_length_246_cov_0.884393_g9857_i0 | PRJNA815356 | 10020 | 246 | 0.884393 | 2.17560678 | Ursus arctos | 9644 | Chordata | Chordata | 161 | 3.54e-35 | NTclustered | gi|2517362063|ref|XM_026499481.4| | 9644 | g9857 | i0 | 86.897 | 70.5243902439024 | 145 | 17 | 59 | 2 | 101 | 244 | 4815 | 4672 | PREDICTED: Ursus arctos transmembrane protein 154 (TMEM154), transcript variant X2, mRNA | blastn | 17349 | 161 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Ursidae | Ursus | Ursus arctos | |
| 28885972 | 28885972 | PRJNA815356_P_NODE_8848_length_253_cov_0.866667_g8685_i0 | PRJNA815356 | 8848 | 253 | 0.866667 | 2.19266751 | Ailuropoda melanoleuca | 9646 | Chordata | Chordata | 42.7 | 0.0421 | NR | XP_019653845.1 | 9646 | g8685 | i0 | 34.4 | 1.44664031620553 | 61 | 38 | 72.3 | 1 | 231 | 49 | 207 | 265 | XP_019653845.1 UDP-glucuronosyltransferase 1-10 isoform X3 [Ailuropoda melanoleuca] | diamond | 366 | 42.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Ursidae | Ailuropoda | Ailuropoda melanoleuca | |
| 29770012 | 29770012 | PRJNA815356_P_NODE_5571_length_305_cov_2.353448_g5408_i0 | PRJNA815356 | 5571 | 305 | 2.353448 | 7.1780164 | Polypterus senegalus | 55291 | Chordata | Chordata | 43.5 | 0.0155 | NR | KAG2471189.1 | 55291 | g5408 | i0 | 57.1 | 0.344262295081967 | 35 | 15 | 34.4 | 0 | 148 | 252 | 92 | 126 | KAG2471189.1 TCB1 transposase, partial [Polypterus senegalus] | diamond | 105 | 43.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Polypterus | Polypterus senegalus | |
| 31539932 | 31539932 | PRJNA815356_P_NODE_3816_length_355_cov_2.304965_g3653_i0 | PRJNA815356 | 3816 | 355 | 2.304965 | 8.18262575 | Erpetoichthys calabaricus | 27687 | Chordata | Chordata | 130 | 3.41e-34 | NR | XP_051791274.1 | 27687 | g3653 | i0 | 76.7 | 6.91267605633803 | 90 | 20 | 75.2 | 1 | 68 | 334 | 115 | 204 | XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] | diamond | 2454 | 130 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Cladistia | Polypteriformes | Polypteridae | Erpetoichthys | Erpetoichthys calabaricus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;