contig_metadata
5 rows where bioproject = "PRJNA815356", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2503412 | 2503412 | PRJNA815356_P_NODE_1602_length_512_cov_2.735763_g1440_i0 | PRJNA815356 | 1602 | 512 | 2.735763 | 14.00710656 | Bdellovibrio | 958 | Bacteria | Bacteria | 566 | 1.4499999999999996e-156 | NTclustered | gi|2801803968|gb|CP169237.1| | 959 | g1440 | i0 | 87.885 | 216.4296875 | 487 | 51 | 95 | 8 | 1 | 485 | 945144 | 945624 | Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome | blastn | 110812 | 571 | 0.991243432574431 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 11431659 | 11431659 | PRJNA815356_P_NODE_11449_length_227_cov_3.259740_g11286_i0 | PRJNA815356 | 11449 | 227 | 3.25974 | 7.3996098 | Bacteriovorax | 146784 | Bacteria | Bacteria | 392 | 1.0499999999999997e-104 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g11286 | i0 | 97.797 | 215.488986784141 | 227 | 5 | 100 | 0 | 1 | 227 | 1661034 | 1660808 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 48916 | 392 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 11431668 | 11431668 | PRJNA815356_P_NODE_5449_length_308_cov_1.919149_g5286_i0 | PRJNA815356 | 5449 | 308 | 1.919149 | 5.91097892 | Bacteriovorax | 146784 | Bacteria | Bacteria | 357 | 5.44e-94 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g5286 | i0 | 87.869 | 309.623376623377 | 305 | 35 | 99 | 2 | 1 | 304 | 1660825 | 1660522 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 95364 | 357 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 13572706 | 13572706 | PRJNA815356_P_NODE_6311_length_290_cov_2.479263_g6148_i0 | PRJNA815356 | 6311 | 290 | 2.479263 | 7.1898627 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 228 | 4.1599999999999985e-55 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g6148 | i0 | 83.077 | 52.3620689655172 | 260 | 34 | 88 | 9 | 34 | 288 | 3251792 | 3251538 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 15185 | 228 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 14847179 | 14847179 | PRJNA815356_P_NODE_1092_length_610_cov_3.698324_g932_i0 | PRJNA815356 | 1092 | 610 | 3.698324 | 22.5597764 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 990 | 0 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g932 | i0 | 96.053 | 243.34262295082 | 608 | 24 | 99 | 0 | 1 | 608 | 1661047 | 1661654 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 148439 | 990 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;