contig_metadata
14 rows where bioproject = "PRJNA815356" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 819075 | 819075 | PRJNA815356_P_NODE_2321_length_437_cov_3.453297_g2159_i0 | PRJNA815356 | 2321 | 437 | 3.453297 | 15.09090789 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 425 | 2.16e-114 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g2159 | i0 | 84.651 | 81.6659038901602 | 430 | 62 | 98 | 4 | 9 | 437 | 2191109 | 2190683 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 35688 | 425 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 3370011 | 3370011 | PRJNA815356_P_NODE_9763_length_247_cov_0.896552_g9600_i0 | PRJNA815356 | 9763 | 247 | 0.896552 | 2.21448344 | Prosthecobacter debontii | 48467 | Bacteria | Bacteria | 390 | 4.1699999999999997e-104 | NTclustered | gi|164510703|emb|AJ966882.1| | 48467 | g9600 | i0 | 95.181 | 277.975708502024 | 249 | 8 | 100 | 4 | 1 | 247 | 3114 | 3360 | Prosthecobacter debontii 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ala gene, tRNA-Ile gene and ITS1, strain DSM 14044 | blastn | 68660 | 390 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter debontii | |
| 6331991 | 6331991 | PRJNA815356_P_NODE_8785_length_253_cov_1.438889_g8622_i0 | PRJNA815356 | 8785 | 253 | 1.438889 | 3.64038917 | Singulisphaera | 466152 | Bacteria | Bacteria | 340 | 4.379999999999999e-89 | NTclustered | gi|485099129|ref|NR_102524.1| | 466153 | g8622 | i0 | 90.98 | 92.8893280632411 | 255 | 20 | 100 | 3 | 1 | 253 | 3 | 256 | Singulisphaera acidiphila strain MOB10 23S ribosomal RNA gene, complete sequence | blastn | 23501 | 340 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 8880942 | 8880942 | PRJNA815356_P_NODE_8627_length_255_cov_1.285714_g8464_i0 | PRJNA815356 | 8627 | 255 | 1.285714 | 3.2785707 | Planctomycetia | 203683 | Bacteria | Bacteria | 316 | 7.44e-82 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g8464 | i0 | 89.412 | 117.756862745098 | 255 | 21 | 99 | 6 | 1 | 252 | 121326 | 121577 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 30028 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 9747222 | 9747222 | PRJNA815356_P_NODE_9188_length_251_cov_0.876404_g9025_i0 | PRJNA815356 | 9188 | 251 | 0.876404 | 2.19977404 | Bythopirellula goksoeyrii | 1400387 | Bacteria | Bacteria | 276 | 1.24e-69 | NTclustered | gi|1727544988|gb|CP042913.1| | 1400387 | g9025 | i0 | 86.939 | 202.593625498008 | 245 | 32 | 98 | 0 | 4 | 248 | 5093375 | 5093619 | Bythopirellula goksoeyrii strain Pr1d chromosome | blastn | 50851 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Bythopirellula | Bythopirellula goksoeyrii | |
| 10156416 | 10156416 | PRJNA815356_P_NODE_4748_length_325_cov_1.932540_g4585_i0 | PRJNA815356 | 4748 | 325 | 1.93254 | 6.280755 | Bacteria | 2 | Bacteria | Bacteria | 294 | 4.6e-75 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g4585 | i0 | 86.517 | 91.2584615384615 | 267 | 36 | 82 | 0 | 59 | 325 | 2192287 | 2192021 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 29659 | 294 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 10156425 | 10156425 | PRJNA815356_P_NODE_7548_length_269_cov_1.663265_g7385_i0 | PRJNA815356 | 7548 | 269 | 1.663265 | 4.47418285 | Planctomycetia | 203683 | Bacteria | Bacteria | 431 | 2.71e-116 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g7385 | i0 | 95.896 | 82.8847583643123 | 268 | 7 | 99 | 3 | 1 | 267 | 5179151 | 5178887 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 22296 | 431 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 11022881 | 11022881 | PRJNA815356_P_NODE_1349_length_556_cov_3.062112_g1188_i0 | PRJNA815356 | 1349 | 556 | 3.062112 | 17.02534272 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 470 | 1.28e-127 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g1188 | i0 | 82.206 | 209.379496402878 | 562 | 84 | 100 | 14 | 1 | 556 | 2584435 | 2583884 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 116415 | 470 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 12707463 | 12707463 | PRJNA815356_P_NODE_8990_length_252_cov_0.871508_g8827_i0 | PRJNA815356 | 8990 | 252 | 0.871508 | 2.19620016 | Frigoriglobus | 2774146 | Bacteria | Bacteria | 416 | 7.029999999999999e-112 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g8827 | i0 | 96.443 | 114.472222222222 | 253 | 7 | 100 | 2 | 1 | 252 | 2001940 | 2002191 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 28847 | 416 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 16121745 | 16121745 | PRJNA815356_P_NODE_5453_length_308_cov_1.702128_g5290_i0 | PRJNA815356 | 5453 | 308 | 1.702128 | 5.24255424 | Neochlamydia hartmannellae | 112235 | Bacteria | Bacteria | 525 | 1.4099999999999995e-144 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g5290 | i0 | 97.411 | 169.535714285714 | 309 | 7 | 100 | 1 | 1 | 308 | 1114 | 806 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 52217 | 525 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 19945682 | 19945682 | PRJNA815356_P_NODE_4816_length_323_cov_2.424000_g4653_i0 | PRJNA815356 | 4816 | 323 | 2.424 | 7.82952 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 505 | 1.9399999999999995e-138 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g4653 | i0 | 94.785 | 102.349845201238 | 326 | 13 | 100 | 4 | 1 | 323 | 7051281 | 7050957 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 33059 | 505 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 24179554 | 24179554 | PRJNA815356_P_NODE_8699_length_254_cov_1.381215_g8536_i0 | PRJNA815356 | 8699 | 254 | 1.381215 | 3.5082861 | Parachlamydia | 83551 | Bacteria | Bacteria | 324 | 4.43e-84 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g8536 | i0 | 89.883 | 137.582677165354 | 257 | 18 | 100 | 7 | 1 | 254 | 788 | 1039 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 34946 | 327 | 0.990825688073395 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 25045443 | 25045443 | PRJNA815356_P_NODE_4820_length_323_cov_1.984000_g4657_i0 | PRJNA815356 | 4820 | 323 | 1.984 | 6.40832 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 459 | 1.5299999999999999e-124 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g4657 | i0 | 92.523 | 93.0340557275542 | 321 | 22 | 99 | 2 | 4 | 323 | 4421662 | 4421343 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 30050 | 459 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 27148820 | 27148820 | PRJNA815356_P_NODE_9142_length_251_cov_0.876404_g8979_i0 | PRJNA815356 | 9142 | 251 | 0.876404 | 2.19977404 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 43.1 | 0.0294 | NR | MEQ8770546.1 | 2052180 | g8979 | i0 | 35 | 0.717131474103586 | 60 | 34 | 71.7 | 1 | 63 | 242 | 223 | 277 | MEQ8770546.1 hypothetical protein [Phycisphaerales bacterium] | diamond | 180 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;