contig_metadata
16 rows where bioproject = "PRJNA814235", tax_phylum = "Mycoplasmatota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3369638 | 3369638 | PRJNA814235_P_NODE_89123_length_203_cov_3.644578_g87728_i0 | PRJNA814235 | 89123 | 203 | 3.644578 | 7.39849334 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 130 | 7.94e-26 | NTclustered | gi|2921905358|gb|CP182786.1| | 56142 | g87728 | i0 | 97.368 | 1.49753694581281 | 76 | 2 | 75 | 0 | 1 | 76 | 515367 | 515442 | Metamycoplasma faucium strain DC-333 chromosome, complete genome | blastn | 304 | 130 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 7195351 | 7195351 | PRJNA814235_P_NODE_198186_length_150_cov_3.575221_g196791_i0 | PRJNA814235 | 198186 | 150 | 3.575221 | 5.3628315 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 87.9 | 3.35e-13 | NTclustered | gi|2621705280|emb|OY763415.1| | 1898209 | g196791 | i0 | 87.013 | 0.513333333333333 | 77 | 10 | 51 | 0 | 74 | 150 | 1692304 | 1692228 | MAG: Acholeplasmataceae bacterium isolate 742012ca-395f-4069-aabb-f3199e209540 genome assembly, chromosome: 1 | blastn | 77 | 87.9 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 13981559 | 13981559 | PRJNA814235_P_NODE_89631_length_203_cov_3.500000_g88236_i0 | PRJNA814235 | 89631 | 203 | 3.5 | 7.105 | Candidatus Izemoplasma | 2975549 | Bacteria | Bacteria | 80.5 | 8.12e-11 | NTclustered | gi|685629397|gb|CP009415.1| | 1541959 | g88236 | i0 | 88.06 | 7.24137931034483 | 67 | 8 | 33 | 0 | 131 | 197 | 920299 | 920233 | Candidatus Izimaplasma bacterium HR1 chromosome, complete genome | blastn | 1470 | 80.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Candidatus Izemoplasmatales | Candidatus Izemoplasmataceae | Candidatus Izemoplasma | Candidatus Izimoplasma sp. HR1 | ||
| 14845136 | 14845136 | PRJNA814235_P_NODE_194572_length_151_cov_2.438596_g193177_i0 | PRJNA814235 | 194572 | 151 | 2.438596 | 3.68227996 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 99 | 1.56e-16 | NTclustered | gi|2621784632|emb|OY781090.1| | 1898209 | g193177 | i0 | 95.161 | 0.410596026490066 | 62 | 3 | 41 | 0 | 76 | 137 | 369191 | 369130 | MAG: Acholeplasmataceae bacterium isolate ac846720-52a4-4ed8-8e7a-77cd78ec885f genome assembly, chromosome: 1 | blastn | 62 | 99 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 14846041 | 14846041 | PRJNA814235_P_NODE_53752_length_260_cov_1.600897_g52358_i0 | PRJNA814235 | 53752 | 260 | 1.600897 | 4.1623322 | Mycoplasmopsis bovis | 28903 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|1060099568|gb|KX687008.1| | 28903 | g52358 | i0 | 79.762 | 0.323076923076923 | 84 | 9 | 31 | 5 | 68 | 147 | 5077 | 4998 | Mycoplasmopsis bovis strain 422 HAD-superfamily hydrolase gene, partial cds; histidine acid phosphatase family protein gene, complete cds; insertion sequence ISMbov1, 16S ribosomal RNA (rrs1), 23S ribosomal RNA (rrl1), 16S ribosomal RNA (rrs2), and 23S ribosomal RNA (rrl2) genes, complete sequence; and preprotein translocase subunit SecY (secY) gene, partial cds | blastn | 84 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis bovis | |||
| 21627528 | 21627528 | PRJNA814235_P_NODE_111137_length_203_cov_2.042169_g109742_i0 | PRJNA814235 | 111137 | 203 | 2.042169 | 4.14560307 | Mycoplasmopsis | 2767358 | Bacteria | Bacteria | 141 | 3.67e-29 | NTclustered | gi|2111402438|gb|CP068733.1| | 28903 | g109742 | i0 | 100 | 74.5024630541872 | 76 | 0 | 75 | 0 | 1 | 76 | 482283 | 482208 | Mycoplasmopsis bovis strain J81 chromosome, complete genome | blastn | 15124 | 141 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis bovis | |||
| 22495720 | 22495720 | PRJNA814235_P_NODE_98638_length_203_cov_2.518072_g97243_i0 | PRJNA814235 | 98638 | 203 | 2.518072 | 5.11168616 | Mycoplasmatota bacterium WC30 | 3075149 | Bacteria | Bacteria | 84.2 | 6.27e-12 | NTclustered | gi|2877983046|gb|CP134495.1| | 3075149 | g97243 | i0 | 87.5 | 0.733990147783251 | 72 | 9 | 35 | 0 | 1 | 72 | 505643 | 505714 | Mycoplasmatota bacterium WC30 chromosome, complete genome | blastn | 149 | 84.2 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmatota bacterium WC30 | ||||||
| 23771228 | 23771228 | PRJNA814235_P_NODE_90959_length_203_cov_3.228916_g89564_i0 | PRJNA814235 | 90959 | 203 | 3.228916 | 6.55469948 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 89.8 | 1.35e-13 | NTclustered | gi|2621786365|emb|OY782823.1| | 1898209 | g89564 | i0 | 88.889 | 1.05418719211823 | 72 | 8 | 35 | 0 | 132 | 203 | 1073166 | 1073237 | MAG: Acholeplasmataceae bacterium isolate 45ae5b24-82d0-47e0-b430-a4ed073fe207 genome assembly, chromosome: 1 | blastn | 214 | 89.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 27433898 | 27433898 | PRJNA814235_P_NODE_53443_length_260_cov_6.560538_g52049_i0 | PRJNA814235 | 53443 | 260 | 6.560538 | 17.0573988 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 47.4 | 5.5e-4 | NR | MDI3352151.1 | 2094 | g52049 | i0 | 95 | 0.230769230769231 | 20 | 1 | 23.1 | 0 | 18 | 77 | 8 | 27 | MDI3352151.1 hypothetical protein [Mycoplasmopsis arginini] | diamond | 60 | 47.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 27623293 | 27623293 | PRJNA814235_P_NODE_197924_length_150_cov_3.690265_g196529_i0 | PRJNA814235 | 197924 | 150 | 3.690265 | 5.5353975 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 55.1 | 4.53e-7 | NR | MCF7930077.1 | 1898209 | g196529 | i0 | 56.3 | 1.92 | 48 | 15 | 96 | 1 | 149 | 6 | 799 | 840 | MCF7930077.1 hypothetical protein [Acholeplasmataceae bacterium] | diamond | 288 | 55.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 30465473 | 30465473 | PRJNA814235_P_NODE_199573_length_150_cov_3.106195_g198178_i0 | PRJNA814235 | 199573 | 150 | 3.106195 | 4.6592925 | Acholeplasma sp. | 33015 | Bacteria | Bacteria | 50.8 | 1.17e-5 | NR | MFA7417534.1 | 33015 | g198178 | i0 | 71.4 | 1.38 | 42 | 1 | 62 | 1 | 4 | 96 | 87 | 128 | MFA7417534.1 F0F1 ATP synthase subunit A [Acholeplasma sp.] | diamond | 207 | 50.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasma | Acholeplasma sp. | ||
| 31413190 | 31413190 | PRJNA814235_P_NODE_105916_length_203_cov_2.192771_g104521_i0 | PRJNA814235 | 105916 | 203 | 2.192771 | 4.45132513 | Tenericutes bacterium HGW-Tenericutes-6 | 2013849 | Bacteria | Bacteria | 72.4 | 4.94e-13 | NR | PKK93942.1 | 2013849 | g104521 | i0 | 56.6 | 1.12315270935961 | 76 | 22 | 96.1 | 1 | 8 | 202 | 109 | 184 | PKK93942.1 MAG: hypothetical protein CVV61_01990 [Tenericutes bacterium HGW-Tenericutes-6] | diamond | 228 | 72.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Tenericutes bacterium HGW-Tenericutes-6 | ||||||
| 31453713 | 31453713 | PRJNA814235_P_NODE_88056_length_203_cov_4.156627_g86661_i0 | PRJNA814235 | 88056 | 203 | 4.156627 | 8.43795281 | Acholeplasma | 2147 | Bacteria | Bacteria | 54.3 | 1.49e-6 | NR | WIF88958.1 | 2148 | g86661 | i0 | 100 | 1.10837438423645 | 25 | 0 | 36.9 | 0 | 76 | 2 | 56 | 80 | WIF88958.1 beta-ketoacyl-ACP synthase II [Acholeplasma laidlawii] | diamond | 225 | 54.3 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasma | Acholeplasma laidlawii | ||
| 31982494 | 31982494 | PRJNA814235_P_NODE_190798_length_151_cov_2.956140_g189403_i0 | PRJNA814235 | 190798 | 151 | 2.95614 | 4.4637714 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 88.6 | 4.93e-19 | NR | HHX75928.1 | 1898209 | g189403 | i0 | 88.2 | 1.01324503311258 | 51 | 5 | 99.3 | 1 | 151 | 2 | 338 | 388 | HHX75928.1 ABC transporter ATP-binding protein [Acholeplasmataceae bacterium] | diamond | 153 | 88.6 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 32835449 | 32835449 | PRJNA814235_P_NODE_103660_length_203_cov_2.283133_g102265_i0 | PRJNA814235 | 103660 | 203 | 2.283133 | 4.63475999 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 47 | 3.84e-4 | NR | MFA5470705.1 | 1898209 | g102265 | i0 | 100 | 0.369458128078818 | 25 | 0 | 36.9 | 0 | 129 | 203 | 62 | 86 | MFA5470705.1 hypothetical protein [Acholeplasmataceae bacterium] | diamond | 75 | 47 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 32898408 | 32898408 | PRJNA814235_P_NODE_180120_length_152_cov_4.669565_g178725_i0 | PRJNA814235 | 180120 | 152 | 4.669565 | 7.0977388 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 47.4 | 8.36e-5 | NR | WP_282459165.1 | 2094 | g178725 | i0 | 68 | 0.986842105263158 | 25 | 8 | 49.3 | 0 | 141 | 67 | 1 | 25 | WP_282459165.1 hypothetical protein, partial [Mycoplasmopsis arginini] | diamond | 150 | 47.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;