RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA814235", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Cossaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA814235 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7195849 7195849 PRJNA814235_P_NODE_40086_length_301_cov_11.969697_g38695_i0 PRJNA814235 40086 301 11.969697 36.02878797 Betapolyomavirus macacae 1891767 Viruses Viruses 53.9 8.33e-6   NR AAK29054.1 1891767 g38695 i0 70 0.398671096345515 40 12 39.9 0 138 257 498 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 120 53.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
17396510 17396510 PRJNA814235_P_NODE_60454_length_244_cov_16.062802_g59060_i0 PRJNA814235 60454 244 16.062802 39.19323688 Betapolyomavirus macacae 1891767 Viruses Viruses 52.8 1.06e-5   NR AAK29054.1 1891767 g59060 i0 77.1 0.430327868852459 35 8 43 0 138 242 498 532 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 105 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
19945404 19945404 PRJNA814235_P_NODE_91156_length_203_cov_3.192771_g89761_i0 PRJNA814235 91156 203 3.192771 6.48132513 Nupapillomavirus 1 334205 Viruses Viruses 141 3.67e-29   NTclustered gi|9626041|ref|NC_001354.1| 10589 g89761 i0 100 0.748768472906404 76 0 75 0 1 76 3017 3092 Human papillomavirus type 41, complete genome blastn 152 141 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Nupapillomavirus Nupapillomavirus 1
22494844 22494844 PRJNA814235_P_NODE_57618_length_250_cov_13.352113_g56224_i0 PRJNA814235 57618 250 13.352113 33.3802825 Betapolyomavirus macacae 1891767 Viruses Viruses 60.8 1.62e-8   NR AAK29054.1 1891767 g56224 i0 76.9 0.468 39 9 46.8 0 126 242 494 532 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 117 60.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;