RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA814235" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA814235 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2503116 2503116 PRJNA814235_P_NODE_80582_length_211_cov_98.160920_g79187_i0 PRJNA814235 80582 211 98.16092 207.1195412 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 387 4.47e-103   NTclustered gi|83034975|gb|DQ211604.1| 352465 g79187 i0 100 99.9194312796209 209 0 99 0 1 209 310 518 Bodomorpha sp. HFCC57 28S ribosomal RNA gene, partial sequence blastn 21083 387 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC57
3367752 3367752 PRJNA814235_P_NODE_18463_length_444_cov_94.105651_g17121_i0 PRJNA814235 18463 444 94.105651 417.82909044 Bodomorpha sp. HFCC57 352465 SAR_Eukaryotes SAR_Eukaryotes 568 3.449999999999999e-157   NTclustered gi|225216791|gb|FJ176706.1| 352465 g17121 i0 91.727 77.7454954954955 411 30 92 4 30 438 668 1076 Bodomorpha sp. HFCC57 28S ribosomal RNA gene, partial sequence blastn 34519 568 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC57
9745243 9745243 PRJNA814235_P_NODE_22148_length_405_cov_27.600543_g20785_i0 PRJNA814235 22148 405 27.600543 111.78219915 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 399 1.2e-106   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g20785 i0 85.788 59.7086419753086 387 44 94 11 1 382 3659 4039 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 24182 399 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
10154047 10154047 PRJNA814235_P_NODE_106388_length_203_cov_2.180723_g104993_i0 PRJNA814235 106388 203 2.180723 4.42686769 Spongomonas 188972 SAR_Eukaryotes SAR_Eukaryotes 141 3.67e-29   NTclustered gi|33309649|gb|AF411281.1| 188973 g104993 i0 100 35.2955665024631 76 0 75 0 128 203 1509 1584 Spongomonas minima strain ATCC 50405 18S ribosomal RNA gene, complete sequence blastn 7165 141 1 Eukaryota Sar   Cercozoa Imbricatea Spongomonadida Spongomonadidae Spongomonas Spongomonas minima
18667227 18667227 PRJNA814235_P_NODE_137575_length_186_cov_3.114094_g136180_i0 PRJNA814235 137575 186 3.114094 5.79221484 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 220 4.12e-53   NTclustered gi|238617605|gb|FJ973380.1| 45107 g136180 i0 91.411 39.247311827957 163 11 87 3 25 186 2311 2151 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 7300 220 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
18668612 18668612 PRJNA814235_P_NODE_20955_length_417_cov_31.476316_g19594_i0 PRJNA814235 20955 417 31.476316 131.25623772 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 444 5.66e-120   NTclustered gi|238617605|gb|FJ973380.1| 45107 g19594 i0 85.885 100.376498800959 418 57 100 2 1 417 1612 1196 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 41857 444 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
23768630 23768630 PRJNA814235_P_NODE_153199_length_172_cov_1.229630_g151804_i0 PRJNA814235 153199 172 1.22963 2.1149636 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 132 1.8e-26   NTclustered gi|88792583|gb|DQ386164.1| 372086 g151804 i0 95.181 50.4476744186046 83 4 48 0 1 83 1331 1413 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 8677 132 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;