RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA814235", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 4 ✖

tax_kingdom 1

  • Thermotogati · 4 ✖

bioproject 1

  • PRJNA814235 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
818133 818133 PRJNA814235_P_NODE_61821_length_242_cov_2.341463_g60427_i0 PRJNA814235 61821 242 2.341463 5.66634046 Pyramidobacter piscolens 638849 Bacteria Bacteria 67.6 7.78e-7   NTclustered gi|2188906985|dbj|AP025585.1| 638849 g60427 i0 83.333 0.297520661157025 72 12 30 0 2 73 738899 738970 Pyramidobacter piscolens CE91-St28 DNA, complete genome blastn 72 67.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter piscolens
2503281 2503281 PRJNA814235_P_NODE_92422_length_203_cov_3.018072_g91027_i0 PRJNA814235 92422 203 3.018072 6.12668616 Bacteria 2 Bacteria Bacteria 73.1 1.36e-8   NTclustered gi|1050315908|gb|CP016757.1| 1197717 g91027 i0 92.157 3.5615763546798 51 4 25 0 13 63 2616375 2616325 Cloacibacillus porcorum strain CL-84 chromosome, complete genome blastn 723 73.1 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus porcorum
11429597 11429597 PRJNA814235_P_NODE_132869_length_191_cov_4.402597_g131474_i0 PRJNA814235 132869 191 4.402597 8.40896027 Aminithiophilus 3029078 Bacteria Bacteria 137 4.41e-28   NTclustered gi|2041259188|gb|CP074691.1| 2268202 g131474 i0 95.349 43.7643979057592 86 4 45 0 103 188 1344345 1344430 Synergistota bacterium strain L-13 chromosome, complete genome blastn 8359 137 1 Bacteria   Thermotogati Synergistota         Synergistota bacterium
31824232 31824232 PRJNA814235_P_NODE_184957_length_151_cov_3.964912_g183562_i0 PRJNA814235 184957 151 3.964912 5.98701712 Synergistaceae bacterium 2053624 Bacteria Bacteria 48.9 6.79e-5   NR MDR3255309.1 2053624 g183562 i0 76 1.60927152317881 25 6 49.7 0 146 72 413 437 MDR3255309.1 3-phosphoshikimate 1-carboxyvinyltransferase [Synergistaceae bacterium] diamond 243 48.9 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;