RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA814235" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 17 ✖

bioproject 1

  • PRJNA814235 · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1225937 1225937 PRJNA814235_P_NODE_14601_length_498_cov_4.696312_g13314_i0 PRJNA814235 14601 498 4.696312 23.38763376 Thermoproteati 1783275 Archaea Archaea 870 0   NTclustered gi|1497995|gb|U62818.1|UAU62818 50856 g13314 i0 98.193 100.008032128514 498 9 100 0 1 498 191 688 Unidentified archaeon SCA1173 16S small subunit ribosomal RNA gene, partial sequence blastn 49804 876 0.993150684931507 Archaea   Thermoproteati Thermoproteota         unidentified archaeon SCA1173
3779251 3779251 PRJNA814235_P_NODE_66923_length_233_cov_1.464286_g65528_i0 PRJNA814235 66923 233 1.464286 3.41178638 root 1 Root_unresolved Root_unresolved 412 8.299999999999999e-111   NTclustered gi|42406209|gb|AY522900.1| 29281 g65528 i0 98.707 102.562231759657 232 3 99 0 2 233 1221 990 Uncultured crenarchaeote clone MAS3 16S ribosomal RNA gene, partial sequence blastn 23897 412 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
4643817 4643817 PRJNA814235_P_NODE_114604_length_203_cov_1.951807_g113209_i0 PRJNA814235 114604 203 1.951807 3.96216821 Pyrobaculum neutrophilum 70771 Archaea Archaea 52.8 0.018   NTclustered gi|170933697|gb|CP001014.1| 444157 g113209 i0 96.774 0.152709359605911 31 1 15 0 161 191 483618 483588 Pyrobaculum neutrophilum V24Sta, complete genome blastn 31 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum neutrophilum
7605381 7605381 PRJNA814235_P_NODE_65106_length_236_cov_2.025126_g63711_i0 PRJNA814235 65106 236 2.025126 4.77929736 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 270 5.37e-68   NTclustered gi|937513727|gb|CP012850.1| 1353260 g63711 i0 87.931 13.7076271186441 232 24 97 4 1 230 849479 849250 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 3235 272 0.992647058823529 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
9743387 9743387 PRJNA814235_P_NODE_116668_length_203_cov_1.891566_g115273_i0 PRJNA814235 116668 203 1.891566 3.83987898 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 93.5 1.04e-14   NTclustered gi|937513727|gb|CP012850.1| 1353260 g115273 i0 90.141 0.724137931034483 71 7 35 0 128 198 3035560 3035490 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 147 93.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
9745059 9745059 PRJNA814235_P_NODE_194948_length_151_cov_2.219298_g193553_i0 PRJNA814235 194948 151 2.219298 3.35113998 uncultured crenarchaeote 29281 Archaea Archaea 263 5.23e-66   NTclustered gi|22797874|emb|AJ496176.1| 29281 g193553 i0 98.013 46.8675496688742 151 3 100 0 1 151 7903 8053 Uncultured crenarchaeote 34 kb genomic fragment blastn 7077 263 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
12707089 12707089 PRJNA814235_P_NODE_77370_length_216_cov_2.480447_g75975_i0 PRJNA814235 77370 216 2.480447 5.35776552 Thermoproteati 1783275 Archaea Archaea 361 2.79e-95   NTclustered gi|22797874|emb|AJ496176.1| 29281 g75975 i0 96.759 22.1898148148148 216 7 100 0 1 216 6809 6594 Uncultured crenarchaeote 34 kb genomic fragment blastn 4793 361 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
16120920 16120920 PRJNA814235_P_NODE_68313_length_230_cov_3.062176_g66918_i0 PRJNA814235 68313 230 3.062176 7.0430048 uncultured crenarchaeote 29281 Archaea Archaea 359 1.0799999999999999e-94   NTclustered gi|22797874|emb|AJ496176.1| 29281 g66918 i0 94.828 67.504347826087 232 9 99 2 2 230 6108 5877 Uncultured crenarchaeote 34 kb genomic fragment blastn 15526 359 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
19078813 19078813 PRJNA814235_P_NODE_54815_length_257_cov_2.690909_g53421_i0 PRJNA814235 54815 257 2.690909 6.91563613 Thermoproteati 1783275 Archaea Archaea 436 5.52e-118   NTclustered gi|22797874|emb|AJ496176.1| 29281 g53421 i0 97.276 88.7587548638132 257 7 100 0 1 257 8109 8365 Uncultured crenarchaeote 34 kb genomic fragment blastn 22811 440 0.990909090909091 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
19941735 19941735 PRJNA814235_P_NODE_101476_length_203_cov_2.379518_g100081_i0 PRJNA814235 101476 203 2.379518 4.83042154 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 58.4 3.8e-4   NTclustered gi|2893358446|emb|OZ220738.1| 2202732 g100081 i0 100 0.152709359605911 31 0 15 0 14 44 929054 929024 MAG: Nitrosopumilaceae archaeon isolate fffc057b-369a-431a-97bf-40e39b5bab9e genome assembly, chromosome: 1 blastn 31 58.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
20354044 20354044 PRJNA814235_P_NODE_83216_length_208_cov_2.561404_g81821_i0 PRJNA814235 83216 208 2.561404 5.32772032 Thermoproteati 1783275 Archaea Archaea 385 1.58e-102   NTclustered gi|62901621|gb|AY940186.1| 29281 g81821 i0 100 99.9663461538462 208 0 100 0 1 208 214 421 Uncultured crenarchaeote clone BN1 16S ribosomal RNA gene, partial sequence blastn 20793 385 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
22492280 22492280 PRJNA814235_P_NODE_124278_length_201_cov_3.475610_g122883_i0 PRJNA814235 124278 201 3.47561 6.9859761 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 339 1.1999999999999998e-88   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g122883 i0 97.015 23.6616915422886 201 6 100 0 1 201 1792245 1792045 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 4756 339 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola
27275743 27275743 PRJNA814235_P_NODE_24903_length_383_cov_2.644509_g23533_i0 PRJNA814235 24903 383 2.644509 10.12846947 Nitrososphaera sp. 1971748 Archaea Archaea 79.3 2.47e-14   NR MCI0556924.1 1971748 g23533 i0 66.7 1.32375979112272 57 19 44.6 0 212 382 319 375 MCI0556924.1 IS110 family transposase [Nitrososphaera sp.] diamond 507 79.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
30591436 30591436 PRJNA814235_P_NODE_101493_length_203_cov_2.379518_g100098_i0 PRJNA814235 101493 203 2.379518 4.83042154 Candidatus Nitrosocosmicus franklandus 1826864 Archaea Archaea 74.7 3.53e-14   NR WP_134483916.1 1798806 g100098 i0 60.5 1.12315270935961 76 21 99 1 1 201 69 144 WP_134483916.1 nicotinate phosphoribosyltransferase [Candidatus Nitrosocosmicus franklandus] diamond 228 74.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus franklandianus
30812610 30812610 PRJNA814235_P_NODE_124574_length_201_cov_2.634146_g123179_i0 PRJNA814235 124574 201 2.634146 5.29463346 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 48.5 1.95e-4   NR MCW4009962.1 2026714 g123179 i0 84 0.373134328358209 25 4 37.3 0 75 1 266 290 MCW4009962.1 M42 family metallopeptidase [Candidatus Bathyarchaeota archaeon] diamond 75 48.5 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31413254 31413254 PRJNA814235_P_NODE_199816_length_150_cov_3.053097_g198421_i0 PRJNA814235 199816 150 3.053097 4.5796455 Pyrobaculum aerophilum 13773 Archaea Archaea 88.2 1.03e-18   NR WP_116430384.1 13773 g198421 i0 74.2 3.96 66 1 100 1 150 1 482 547 WP_116430384.1 hypothetical protein [Pyrobaculum aerophilum] diamond 594 88.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
31476614 31476614 PRJNA814235_P_NODE_116256_length_203_cov_1.903614_g114861_i0 PRJNA814235 116256 203 1.903614 3.86433642 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 43.5 0.0102   NR MFB3887936.1 3045160 g114861 i0 75 0.354679802955665 24 6 35.5 0 131 202 199 222 MFB3887936.1 anaerobic ribonucleoside-triphosphate reductase activating protein [Candidatus Bathyarchaeia archaeon] diamond 72 43.5 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;