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contig_metadata

6 rows where bioproject = "PRJNA814235", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA814235 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3777789 3777789 PRJNA814235_P_NODE_142423_length_181_cov_3.312500_g141028_i0 PRJNA814235 142423 181 3.3125 5.995625 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 324 2.95e-84   NTclustered gi|1802599796|gb|MT001205.1| 41631 g141028 i0 98.895 100.674033149171 181 2 100 0 1 181 309 129 Colpoda sp. strain HFCC864 small subunit ribosomal RNA gene, partial sequence blastn 18222 324 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
5920072 5920072 PRJNA814235_P_NODE_182465_length_151_cov_5.991228_g181070_i0 PRJNA814235 182465 151 5.9912280000000004 9.04675428 Stentor sp. 1431124 SAR_Eukaryotes SAR_Eukaryotes 141 2.56e-29   NTclustered gi|1820251602|gb|MT175596.1| 1431124 g181070 i0 98.734 9.79470198675497 79 1 100 0 1 79 1560 1482 Stentor sp. isolate CY2019012101 large subunit ribosomal RNA gene, partial sequence blastn 1479 141 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor sp.
11022419 11022419 PRJNA814235_P_NODE_81989_length_210_cov_1.734104_g80594_i0 PRJNA814235 81989 210 1.734104 3.6416184 Trachelostyla pediculiformis 330974 SAR_Eukaryotes SAR_Eukaryotes 333 5.879999999999999e-87   NTclustered gi|759083510|gb|KM222127.1| 330974 g80594 i0 95.238 98.4809523809524 210 10 100 0 1 210 1662 1453 Trachelostyla pediculiformis voucher JY0811100401 large subunit ribosomal RNA gene, partial sequence blastn 20681 333 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Trachelostylidae Trachelostyla Trachelostyla pediculiformis
13568895 13568895 PRJNA814235_P_NODE_113531_length_203_cov_1.975904_g112136_i0 PRJNA814235 113531 203 1.975904 4.01108512 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 141 3.67e-29   NTclustered gi|219936024|emb|AM158581.1| 187299 g112136 i0 100 69.8226600985222 76 0 75 0 128 203 275 200 Uncultured ciliate partial 18S rRNA gene, clone H568 blastn 14174 141 1 Eukaryota Sar   Ciliophora         uncultured ciliate
16119057 16119057 PRJNA814235_P_NODE_167973_length_160_cov_2.918699_g166578_i0 PRJNA814235 167973 160 2.918699 4.6699184 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 255 9.42e-64   NTclustered gi|220966760|gb|FJ545743.1| 94289 g166578 i0 95.597 99.33125 159 7 99 0 2 160 6771 6613 Sterkiella histriomuscorum 17S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; macronuclear blastn 15893 255 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
19943266 19943266 PRJNA814235_P_NODE_173516_length_157_cov_0.883333_g172121_i0 PRJNA814235 173516 157 0.883333 1.38683281 Trithigmostoma cucullulus 1346499 SAR_Eukaryotes SAR_Eukaryotes 274 2.54e-69   NTclustered gi|759083539|gb|KM222156.1| 1346499 g172121 i0 98.089 7.03821656050955 157 3 100 0 1 157 74 230 Trithigmostoma cucullulus voucher CXM08110902 large subunit ribosomal RNA gene, partial sequence blastn 1105 274 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Trithigmostoma Trithigmostoma cucullulus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;