RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA814235", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_phylum = "Nitrospinota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrospinota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA814235 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29399876 29399876 PRJNA814235_P_NODE_118429_length_203_cov_1.825301_g117034_i0 PRJNA814235 118429 203 1.825301 3.70536103 Pseudomonadati 3379134 Bacteria Bacteria 44.3 0.00642   NR MDH5761345.1 2026769 g117034 i0 62.5 3.19211822660099 24 9 35.5 0 201 130 1061 1084 MDH5761345.1 acyl-[ACP]--phospholipid O-acyltransferase [Nitrospinota bacterium] diamond 648 44.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
32267513 32267513 PRJNA814235_P_NODE_105678_length_203_cov_2.204819_g104283_i0 PRJNA814235 105678 203 2.204819 4.47578257 Nitrospinota bacterium 2026769 Bacteria Bacteria 46.6 9.45e-4   NR MBI3329296.1 2026769 g104283 i0 88 1.10837438423645 25 3 36.9 0 129 203 339 363 MBI3329296.1 L-2-hydroxyglutarate oxidase [Nitrospinota bacterium] diamond 225 46.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;