RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA813520", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA813520 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13979273 13979273 PRJNA813520_S_NODE_171_length_759_cov_7.794521_g144_i0 PRJNA813520 171 759 7.794521 59.16041439 Metazoa 33208 Platyhelminthes Platyhelminthes 1395 0   NTclustered gi|60687563|gb|AY914894.1| 6182 g144 i0 100 99.9868247694335 755 0 99 0 5 759 784 30 Schistosoma japonicum unknown mRNA blastn 75890 1397 0.998568360773085 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
27947551 27947551 PRJNA813520_S_NODE_1805_length_271_cov_3.223140_g1758_i0 PRJNA813520 1805 271 3.22314 8.7347094 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.7 5.19e-8   NR VDK74789.1 60516 g1758 i0 37.6 10.5830258302583 85 51 91.9 1 21 269 123 207 VDK74789.1 unnamed protein product, partial [Dibothriocephalus latus] diamond 2868 60.1 0.993344425956739 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Dibothriocephalus Dibothriocephalus latus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;