contig_metadata
27 rows where bioproject = "PRJNA812715" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 811871 | 811871 | PRJNA812715_P_NODE_107421_length_248_cov_0.880000_g105620_i0 | PRJNA812715 | 107421 | 248 | 0.88 | 2.1824 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 115 | 2.82e-21 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g105620 | i0 | 98.462 | 23.7258064516129 | 65 | 1 | 26 | 0 | 184 | 248 | 1847312 | 1847376 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 5884 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 4642448 | 4642448 | PRJNA812715_P_NODE_62484_length_330_cov_0.898833_g60685_i0 | PRJNA812715 | 62484 | 330 | 0.898833 | 2.9661489 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 418 | 2.66e-112 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g60685 | i0 | 89.634 | 82.0666666666667 | 328 | 34 | 99 | 0 | 2 | 329 | 3573445 | 3573118 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 27082 | 418 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 7190832 | 7190832 | PRJNA812715_P_NODE_22186_length_702_cov_1.944356_g20516_i0 | PRJNA812715 | 22186 | 702 | 1.944356 | 13.64937912 | Candidatus Xiphinematobacter sp. | 1903058 | Bacteria | Bacteria | 545 | 2.64e-150 | NTclustered | gi|1966850802|gb|CP068472.1| | 1903058 | g20516 | i0 | 93.048 | 0.871794871794872 | 374 | 24 | 53 | 2 | 271 | 643 | 244070 | 244442 | MAG: Candidatus Xiphinematobacter sp. isolate P3-11 chromosome, complete genome | blastn | 612 | 545 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Candidatus Xiphinematobacter | Candidatus Xiphinematobacter sp. | |||
| 9742668 | 9742668 | PRJNA812715_P_NODE_84408_length_277_cov_1.995098_g82608_i0 | PRJNA812715 | 84408 | 277 | 1.995098 | 5.52642146 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 486 | 5.9e-133 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g82608 | i0 | 98.545 | 143.942238267148 | 275 | 4 | 99 | 0 | 3 | 277 | 737014 | 737288 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 39872 | 486 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 11018110 | 11018110 | PRJNA812715_P_NODE_72709_length_299_cov_1.703540_g70909_i0 | PRJNA812715 | 72709 | 299 | 1.70354 | 5.0935846 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 150 | 3.05e-41 | NR | MFV1994506.1 | 2026801 | g70909 | i0 | 74.5 | 4.89632107023411 | 98 | 24 | 98.3 | 1 | 3 | 296 | 61 | 157 | MFV1994506.1 IS110 family transposase [Verrucomicrobiales bacterium] | diamond | 1464 | 150 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 19941231 | 19941231 | PRJNA812715_P_NODE_84576_length_277_cov_1.509804_g82776_i0 | PRJNA812715 | 84576 | 277 | 1.509804 | 4.18215708 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 64.3 | 8.45e-11 | NR | MBU6401876.1 | 2026799 | g82776 | i0 | 53.2 | 1.32129963898917 | 62 | 26 | 63.9 | 1 | 186 | 10 | 1 | 62 | MBU6401876.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 366 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27307369 | 27307369 | PRJNA812715_P_NODE_77623_length_288_cov_1.600000_g75823_i0 | PRJNA812715 | 77623 | 288 | 1.6 | 4.608 | Verrucomicrobiia bacterium Tous-C4TDCM | 1982332 | Bacteria | Bacteria | 44.3 | 0.0179 | NR | PAW68231.1 | 1982332 | g75823 | i0 | 35 | 0.833333333333333 | 80 | 46 | 78.1 | 3 | 12 | 236 | 28 | 106 | PAW68231.1 MAG: hypothetical protein B9S38_11415 [Verrucomicrobiia bacterium Tous-C4TDCM] | diamond | 240 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium Tous-C4TDCM | ||||
| 27623160 | 27623160 | PRJNA812715_P_NODE_103724_length_250_cov_0.870056_g101923_i0 | PRJNA812715 | 103724 | 250 | 0.870056 | 2.17514 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 90.9 | 1.31e-19 | NR | MDB6053684.1 | 2026801 | g101923 | i0 | 64.5 | 0.912 | 76 | 27 | 91.2 | 0 | 247 | 20 | 242 | 317 | MDB6053684.1 transaldolase-like [Verrucomicrobiales bacterium] | diamond | 228 | 90.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 27695203 | 27695203 | PRJNA812715_P_NODE_52204_length_371_cov_1.771812_g50406_i0 | PRJNA812715 | 52204 | 371 | 1.771812 | 6.57342252 | Bacteria | 2 | Bacteria | Bacteria | 99.4 | 2.35e-21 | NR | MCF7764028.1 | 2026799 | g50406 | i0 | 43.7 | 2.88679245283019 | 119 | 65 | 94.6 | 2 | 2 | 352 | 533 | 651 | MCF7764028.1 thioredoxin domain-containing protein [Verrucomicrobiota bacterium] | diamond | 1071 | 99.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27718157 | 27718157 | PRJNA812715_P_NODE_95384_length_260_cov_1.647059_g93583_i0 | PRJNA812715 | 95384 | 260 | 1.647059 | 4.2823534 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 152 | 7.62e-44 | NR | WP_300203647.1 | 1965333 | g93583 | i0 | 89.4 | 1.96153846153846 | 85 | 9 | 98.1 | 0 | 258 | 4 | 121 | 205 | WP_300203647.1 pyridoxine 5'-phosphate synthase [Prosthecobacter sp.] | diamond | 510 | 152 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 27749519 | 27749519 | PRJNA812715_P_NODE_119804_length_242_cov_0.911243_g118003_i0 | PRJNA812715 | 119804 | 242 | 0.911243 | 2.20520806 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 40.8 | 0.0407 | NR | HYJ04583.1 | 2201154 | g118003 | i0 | 37 | 0.669421487603306 | 54 | 34 | 66.9 | 0 | 164 | 3 | 24 | 77 | HYJ04583.1 hypothetical protein [Chthoniobacterales bacterium] | diamond | 162 | 40.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 28673746 | 28673746 | PRJNA812715_P_NODE_121227_length_241_cov_0.916667_g119426_i0 | PRJNA812715 | 121227 | 241 | 0.916667 | 2.20916747 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 76.3 | 4.36e-14 | NR | HWW50164.1 | 2499141 | g119426 | i0 | 42.9 | 2.87551867219917 | 77 | 44 | 95.9 | 0 | 240 | 10 | 273 | 349 | HWW50164.1 amidohydrolase family protein [Verrucomicrobiia bacterium] | diamond | 693 | 76.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28705396 | 28705396 | PRJNA812715_P_NODE_38687_length_458_cov_1.457143_g36896_i0 | PRJNA812715 | 38687 | 458 | 1.457143 | 6.67371494 | Bacteria | 2 | Bacteria | Bacteria | 132 | 1.04e-33 | NR | MBC8245344.1 | 2026799 | g36896 | i0 | 52.7 | 5.04366812227074 | 110 | 52 | 72.1 | 0 | 458 | 129 | 307 | 416 | MBC8245344.1 aromatic ring-hydroxylating dioxygenase subunit alpha [Verrucomicrobiota bacterium] | diamond | 2310 | 132 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29233409 | 29233409 | PRJNA812715_P_NODE_74469_length_294_cov_2.746606_g72669_i0 | PRJNA812715 | 74469 | 294 | 2.746606 | 8.07502164 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 158 | 1.7799999999999994e-42 | NR | MEK7676769.1 | 2026799 | g72669 | i0 | 70.4 | 3 | 98 | 28 | 99 | 1 | 2 | 292 | 407 | 504 | MEK7676769.1 N-6 DNA methylase [Verrucomicrobiota bacterium] | diamond | 882 | 158 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29431237 | 29431237 | PRJNA812715_P_NODE_53909_length_363_cov_1.900000_g52110_i0 | PRJNA812715 | 53909 | 363 | 1.9 | 6.897 | root | 1 | Root_unresolved | Root_unresolved | 144 | 9.929999999999999e-40 | NR | HCP06138.1 | 2026801 | g52110 | i0 | 63.8 | 1.90909090909091 | 116 | 38 | 95.9 | 1 | 16 | 363 | 171 | 282 | HCP06138.1 transaldolase [Verrucomicrobiales bacterium] | diamond | 693 | 144 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 29643381 | 29643381 | PRJNA812715_P_NODE_122370_length_238_cov_3.272727_g120569_i0 | PRJNA812715 | 122370 | 238 | 3.272727 | 7.78909026 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 78.2 | 9.25e-15 | NR | MEI6338739.1 | 2026799 | g120569 | i0 | 50 | 1.94117647058824 | 78 | 39 | 98.3 | 0 | 3 | 236 | 215 | 292 | MEI6338739.1 acetyl esterase [Verrucomicrobiota bacterium] | diamond | 462 | 78.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29674999 | 29674999 | PRJNA812715_P_NODE_56590_length_352_cov_1.082437_g54791_i0 | PRJNA812715 | 56590 | 352 | 1.082437 | 3.81017824 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 149 | 2.55e-41 | NR | MDP4647811.1 | 2562705 | g54791 | i0 | 58.6 | 6.92045454545455 | 116 | 48 | 98.9 | 0 | 3 | 350 | 141 | 256 | MDP4647811.1 ROK family protein [Akkermansiaceae bacterium] | diamond | 2436 | 149 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 30347953 | 30347953 | PRJNA812715_P_NODE_23012_length_682_cov_1.896552_g21328_i0 | PRJNA812715 | 23012 | 682 | 1.896552 | 12.93448464 | PVC group | 1783257 | Bacteria | Bacteria | 59.3 | 3.19e-6 | NR | MDF1816644.1 | 2026801 | g21328 | i0 | 32.7 | 1.0733137829912 | 113 | 62 | 44 | 4 | 2 | 301 | 114 | 225 | MDF1816644.1 protein kinase [Verrucomicrobiales bacterium] | diamond | 732 | 59.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 30812525 | 30812525 | PRJNA812715_P_NODE_106094_length_249_cov_0.875000_g104293_i0 | PRJNA812715 | 106094 | 249 | 0.875 | 2.17875 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 53.9 | 3.84e-6 | NR | HTM06905.1 | 2499141 | g104293 | i0 | 41.1 | 5.51807228915663 | 73 | 35 | 81.9 | 3 | 215 | 12 | 209 | 278 | HTM06905.1 vitamin K epoxide reductase family protein [Verrucomicrobiia bacterium] | diamond | 1374 | 53.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 30970689 | 30970689 | PRJNA812715_P_NODE_114154_length_245_cov_0.895349_g112353_i0 | PRJNA812715 | 114154 | 245 | 0.895349 | 2.19360505 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 171 | 2.84e-49 | NR | WP_395733751.1 | 1965333 | g112353 | i0 | 93.8 | 3.96734693877551 | 81 | 5 | 99.2 | 0 | 245 | 3 | 273 | 353 | WP_395733751.1 SBBP repeat-containing protein [Prosthecobacter sp.] | diamond | 972 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 31010876 | 31010876 | PRJNA812715_P_NODE_68474_length_310_cov_2.966245_g66674_i0 | PRJNA812715 | 68474 | 310 | 2.966245 | 9.1953595 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 85.5 | 7.48e-17 | NR | HEX3730016.1 | 2006848 | g66674 | i0 | 79.6 | 2.91290322580645 | 49 | 10 | 47.4 | 0 | 150 | 4 | 172 | 220 | HEX3730016.1 carboxylesterase family protein [Opitutaceae bacterium] | diamond | 903 | 86.3 | 0.990730011587486 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 31517014 | 31517014 | PRJNA812715_P_NODE_59896_length_339_cov_1.447368_g58097_i0 | PRJNA812715 | 59896 | 339 | 1.447368 | 4.90657752 | PVC group | 1783257 | Bacteria | Bacteria | 61.6 | 2.68e-8 | NR | MDB6077804.1 | 2562705 | g58097 | i0 | 38.8 | 1.3716814159292 | 85 | 48 | 71.7 | 2 | 323 | 81 | 107 | 191 | MDB6077804.1 Por secretion system C-terminal sorting protein [Akkermansiaceae bacterium] | diamond | 465 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium | ||
| 31666090 | 31666090 | PRJNA812715_P_NODE_62497_length_330_cov_0.856031_g60698_i0 | PRJNA812715 | 62497 | 330 | 0.856031 | 2.8249023 | Chthoniobacter sp. | 2510640 | Bacteria | Bacteria | 135 | 1.49e-34 | NR | MCE9611332.1 | 2510640 | g60698 | i0 | 73 | 2.42727272727273 | 89 | 24 | 80.9 | 0 | 325 | 59 | 572 | 660 | MCE9611332.1 transketolase [Chthoniobacter sp.] | diamond | 801 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter sp. | |
| 31729357 | 31729357 | PRJNA812715_P_NODE_121757_length_241_cov_0.916667_g119956_i0 | PRJNA812715 | 121757 | 241 | 0.916667 | 2.20916747 | Terrimicrobiaceae bacterium | 2832348 | Bacteria | Bacteria | 101 | 4.34e-25 | NR | HEY5779780.1 | 2832348 | g119956 | i0 | 65.9 | 1.79253112033195 | 82 | 26 | 99.6 | 2 | 1 | 240 | 7 | 88 | HEY5779780.1 hypothetical protein [Terrimicrobiaceae bacterium] | diamond | 432 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Terrimicrobiia | Terrimicrobiales | Terrimicrobiaceae | Terrimicrobiaceae bacterium | ||
| 31982403 | 31982403 | PRJNA812715_P_NODE_49918_length_383_cov_1.248387_g48121_i0 | PRJNA812715 | 49918 | 383 | 1.248387 | 4.78132221 | Chthoniobacter sp. | 2510640 | Bacteria | Bacteria | 174 | 3.55e-48 | NR | HEY3901011.1 | 2510640 | g48121 | i0 | 69.4 | 0.971279373368146 | 124 | 38 | 97.1 | 0 | 381 | 10 | 272 | 395 | HEY3901011.1 transketolase [Chthoniobacter sp.] | diamond | 372 | 174 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter sp. | |
| 32267493 | 32267493 | PRJNA812715_P_NODE_77078_length_289_cov_1.425926_g75278_i0 | PRJNA812715 | 77078 | 289 | 1.425926 | 4.12092614 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 177 | 1.2799999999999999e-52 | NR | MDB6060895.1 | 2026800 | g75278 | i0 | 82.1 | 0.986159169550173 | 95 | 17 | 98.6 | 0 | 3 | 287 | 111 | 205 | MDB6060895.1 dihydrodipicolinate reductase [Verrucomicrobiaceae bacterium] | diamond | 285 | 177 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32330903 | 32330903 | PRJNA812715_P_NODE_118999_length_242_cov_0.911243_g117198_i0 | PRJNA812715 | 118999 | 242 | 0.911243 | 2.20520806 | Verrucomicrobia bacterium LW23 | 2161867 | Bacteria | Bacteria | 71.6 | 2.4e-12 | NR | PTY02311.1 | 2161867 | g117198 | i0 | 43.8 | 0.991735537190083 | 80 | 43 | 96.7 | 1 | 9 | 242 | 436 | 515 | PTY02311.1 hypothetical protein DB346_09375 [Verrucomicrobia bacterium LW23] | diamond | 240 | 71.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium LW23 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;