RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA812715" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA812715 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11428954 11428954 PRJNA812715_P_NODE_64549_length_322_cov_13.325301_g62750_i0 PRJNA812715 64549 322 13.325301 42.90746922 root 1 Root_unresolved Root_unresolved 185 2.86e-42   NTclustered gi|530527584|gb|KF493877.1| 10359 g62750 i0 89.262 89.5652173913043 149 15 90 1 162 310 2430 2283 Human herpesvirus 5 transgenic isolate Towne-BAC-der, complete genome blastn 28840 185 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
22902724 22902724 PRJNA812715_P_NODE_66718_length_315_cov_2.417355_g64918_i0 PRJNA812715 66718 315 2.417355 7.61466825 root 1 Root_unresolved Root_unresolved 387 7.1199999999999985e-103   NTclustered gi|2893578454|gb|OR703024.1| 10334 g64918 i0 92.565 10.4634920634921 269 20 85 0 47 315 71394 71126 Mutant Felid alphaherpesvirus 1 isolate FHV-GZeGTmC2, partial genome blastn 3296 388 0.997422680412371 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Varicellovirus Varicellovirus felidalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;