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contig_metadata

28 rows where bioproject = "PRJNA812715" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2089156 2089156 PRJNA812715_P_NODE_46542_length_401_cov_2.429878_g44745_i0 PRJNA812715 46542 401 2.429878 9.74381078 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 198 7.94e-62   NR XP_003139952.1 7209 g44745 i0 71.4 23.8428927680798 133 38 99.5 0 399 1 37 169 XP_003139952.1 50S ribosomal protein L16 [Loa loa] diamond 9561 199 0.994974874371859 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
3364445 3364445 PRJNA812715_P_NODE_50003_length_382_cov_2.686084_g48206_i0 PRJNA812715 50003 382 2.686084 10.26084088 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 155 1.5499999999999996e-43   NR KAL3121024.1 157864 g48206 i0 69.7 24.6910994764398 99 30 77.7 0 369 73 114 212 KAL3121024.1 hypothetical protein niasHT_005284 [Heterodera trifolii] diamond 9432 155 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
9740187 9740187 PRJNA812715_P_NODE_117708_length_243_cov_0.905882_g115907_i0 PRJNA812715 117708 243 0.905882 2.20129326 Caenorhabditis 6237 Nematoda Nematoda 114 2.0100000000000003e-27   NR AAD46625.1 6239 g115907 i0 64.6 4.87654320987654 79 26 97.5 1 241 5 56 132 AAD46625.1 thioredoxin reductase homolog [Caenorhabditis elegans] diamond 1185 115 0.991304347826087 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
12292399 12292399 PRJNA812715_P_NODE_37670_length_466_cov_5.201018_g35881_i0 PRJNA812715 37670 466 5.201018 24.23674388 Caenorhabditis elegans 6239 Nematoda Nematoda 54.7 0.013   NTclustered gi|1831517864|ref|NM_001136422.4| 6239 g35881 i0 100 0.248927038626609 29 0 6 0 385 413 36 8 Caenorhabditis elegans FIP (Fungus-Induced Protein) Related (fipr-2), partial mRNA blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
14842207 14842207 PRJNA812715_P_NODE_66412_length_316_cov_2.534979_g64612_i0 PRJNA812715 66412 316 2.534979 8.01053364 Soboliphyme baturini 241478 Nematoda Nematoda 147 7.249999999999999e-43   NR VDP44206.1 241478 g64612 i0 77.3 6.44620253164557 97 22 92.1 0 315 25 50 146 VDP44206.1 unnamed protein product [Soboliphyme baturini] diamond 2037 147 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
16114289 16114289 PRJNA812715_P_NODE_106873_length_248_cov_2.022857_g105072_i0 PRJNA812715 106873 248 2.022857 5.01668536 Metazoa 33208 Nematoda Nematoda 78.2 1.35e-14   NR XP_042929039.1 6279 g105072 i0 45.3 12.3266129032258 86 42 98 1 2 244 1817 1902 XP_042929039.1 Uncharacterized protein BM_BM3778 [Brugia malayi] diamond 3057 78.6 0.994910941475827 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Brugia Brugia malayi
17391935 17391935 PRJNA812715_P_NODE_49974_length_382_cov_341.886731_g48177_i0 PRJNA812715 49974 382 341.886731 1306.00731242 Caenorhabditis remanei 31234 Nematoda Nematoda 52.8 0.036   NTclustered gi|2445383759|ref|XM_053732915.1| 31234 g48177 i0 100 0.146596858638743 28 0 7 0 149 176 657 630 Caenorhabditis remanei uncharacterized protein (GCK72_019189), partial mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
24176596 24176596 PRJNA812715_P_NODE_36819_length_474_cov_2.239401_g35031_i0 PRJNA812715 36819 474 2.239401 10.61476074 Rhabditida 6236 Nematoda Nematoda 287 1.16e-72   NTclustered gi|150982009|gb|EF634593.1| 452810 g35031 i0 80.315 51.8270042194093 381 73 80 2 81 460 401 22 Pristionchus sp. 3 CZ3975 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 24566 289 0.993079584775087 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus sp. 3 CZ3975
26746194 26746194 PRJNA812715_P_NODE_91041_length_267_cov_1.190722_g89240_i0 PRJNA812715 91041 267 1.190722 3.17922774 Rhabditida 6236 Nematoda Nematoda 98.6 6.01e-23   NR TMS35524.1 34508 g89240 i0 66.2 7.97752808988764 71 24 79.8 0 1 213 180 250 TMS35524.1 hypothetical protein L596_002912 [Steinernema carpocapsae] diamond 2130 98.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
26959238 26959238 PRJNA812715_P_NODE_97262_length_257_cov_1.847826_g95461_i0 PRJNA812715 97262 257 1.847826 4.74891282 Nippostrongylus brasiliensis 27835 Nematoda Nematoda 53.5 6.97e-6   NR VDL63975.1 27835 g95461 i0 51 6.40856031128405 51 22 56 1 7 150 574 624 VDL63975.1 unnamed protein product [Nippostrongylus brasiliensis] diamond 1647 53.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heligmosomidae Nippostrongylus Nippostrongylus brasiliensis
27433815 27433815 PRJNA812715_P_NODE_78123_length_287_cov_2.168224_g76323_i0 PRJNA812715 78123 287 2.168224 6.22280288 Caenorhabditis angaria 860376 Nematoda Nematoda 72.8 1.49e-12   NR CAI5444007.1 860376 g76323 i0 45 0.836236933797909 80 42 83.6 1 287 48 164 241 CAI5444007.1 unnamed protein product [Caenorhabditis angaria] diamond 240 72.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
28042276 28042276 PRJNA812715_P_NODE_104585_length_250_cov_0.870056_g102784_i0 PRJNA812715 104585 250 0.870056 2.17514 Metazoa 33208 Nematoda Nematoda 133 2.07e-36   NR ULT84405.1 6238 g102784 i0 79 95.424 81 17 97.2 0 248 6 138 218 ULT84405.1 hypothetical protein L3Y34_013227 [Caenorhabditis briggsae] diamond 23856 134 0.992537313432836 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
28958086 28958086 PRJNA812715_P_NODE_38108_length_463_cov_1.125641_g36319_i0 PRJNA812715 38108 463 1.125641 5.21171783 Nematoda 6231 Nematoda Nematoda 158 4.799999999999998e-44   NR XP_024499887.1 34506 g36319 i0 51.9 6.9719222462203 154 74 99.8 0 463 2 140 293 XP_024499887.1 Adenosine kinase [Strongyloides ratti] diamond 3228 158 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
29138813 29138813 PRJNA812715_P_NODE_44289_length_416_cov_0.895044_g42493_i0 PRJNA812715 44289 416 0.895044 3.72338304 Caenorhabditis angaria 860376 Nematoda Nematoda 52 7.02e-5   NR CAI5438176.1 860376 g42493 i0 30.4 0.995192307692308 138 95 98.8 1 413 3 21 158 CAI5438176.1 unnamed protein product [Caenorhabditis angaria] diamond 414 52 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis angaria
29643402 29643402 PRJNA812715_P_NODE_52750_length_368_cov_2.600000_g50952_i0 PRJNA812715 52750 368 2.6 9.568 Heterodera trifolii 157864 Nematoda Nematoda 177 1.65e-50   NR KAL3076089.1 157864 g50952 i0 73 9.78260869565217 122 31 97.8 2 364 5 337 458 KAL3076089.1 hypothetical protein niasHT_034153 [Heterodera trifolii] diamond 3600 177 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
29706460 29706460 PRJNA812715_P_NODE_53510_length_365_cov_1.575342_g51711_i0 PRJNA812715 53510 365 1.575342 5.7499983 Diploscapter pachys 2018661 Nematoda Nematoda 145 3.789999999999999e-42   NR PAV90868.1 2018661 g51711 i0 71.7 9.9041095890411 120 33 98.6 1 365 6 9 127 PAV90868.1 hypothetical protein WR25_18332 [Diploscapter pachys] diamond 3615 145 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
30062955 30062955 PRJNA812715_P_NODE_12071_length_1118_cov_2.463158_g10856_i0 PRJNA812715 12071 1118 2.463158 27.53810644 Rhabditida 6236 Nematoda Nematoda 223 2.3099999999999997e-66   NR KAE9415242.1 6313 g10856 i0 44.6 4.61806797853309 345 142 89.9 14 15 1019 6 311 KAE9415242.1 hypothetical protein Angca_005126 [Angiostrongylus cantonensis] diamond 5163 225 0.991111111111111 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
30821378 30821378 PRJNA812715_P_NODE_45934_length_405_cov_1.614458_g44138_i0 PRJNA812715 45934 405 1.614458 6.5385549 Metazoa 33208 Nematoda Nematoda 122 4.07e-29   NR VDM07852.1 6293 g44138 i0 52.9 31.6888888888889 104 48 76.3 1 2 310 838 941 VDM07852.1 unnamed protein product [Wuchereria bancrofti] diamond 12834 123 0.991869918699187 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
31074219 31074219 PRJNA812715_P_NODE_65675_length_319_cov_1.215447_g63875_i0 PRJNA812715 65675 319 1.215447 3.87727593 Trichinella 6333 Nematoda Nematoda 73.9 1.07e-12   NR KRY38019.1 6334 g63875 i0 60.4 8.47335423197492 53 21 49.8 0 165 7 1519 1571 KRY38019.1 Protein CLEC16A [Trichinella spiralis] diamond 2703 74.3 0.994616419919246 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
31263799 31263799 PRJNA812715_P_NODE_105815_length_249_cov_0.875000_g104014_i0 PRJNA812715 105815 249 0.875 2.17875 Rhabditida 6236 Nematoda Nematoda 45.8 0.00336   NR RCN51709.1 29170 g104014 i0 44 7.66265060240964 50 25 60.2 1 155 6 1239 1285 RCN51709.1 hypothetical protein ANCCAN_02069 [Ancylostoma caninum] diamond 1908 46.2 0.991341991341991 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
31390441 31390441 PRJNA812715_P_NODE_103876_length_250_cov_0.870056_g102075_i0 PRJNA812715 103876 250 0.870056 2.17514 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 0.00256   NR KAH7730679.1 70226 g102075 i0 47.7 1.92 44 23 52.8 0 196 65 869 912 KAH7730679.1 spectrin repeat-containing domain protein, partial [Aphelenchoides avenae] diamond 480 46.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
31634440 31634440 PRJNA812715_P_NODE_119196_length_242_cov_0.911243_g117395_i0 PRJNA812715 119196 242 0.911243 2.20520806 Mesorhabditis belari 2138241 Nematoda Nematoda 63.5 1.71e-9   NR CAJ0953725.1 2138241 g117395 i0 41 0.966942148760331 78 46 96.7 0 1 234 406 483 CAJ0953725.1 unnamed protein product, partial [Mesorhabditis belari] diamond 234 63.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
31666071 31666071 PRJNA812715_P_NODE_118877_length_242_cov_0.911243_g117076_i0 PRJNA812715 118877 242 0.911243 2.20520806 Ancylostoma ceylanicum 53326 Nematoda Nematoda 42.7 0.0371   NR EYB96628.1 53326 g117076 i0 36.7 0.607438016528926 49 31 60.7 0 66 212 693 741 EYB96628.1 hypothetical protein Y032_0148g2638 [Ancylostoma ceylanicum] diamond 147 42.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
31887495 31887495 PRJNA812715_P_NODE_101377_length_251_cov_1.707865_g99576_i0 PRJNA812715 101377 251 1.707865 4.28674115 Aphelenchoides avenae 70226 Nematoda Nematoda 60.8 1.65e-8   NR KAH7731482.1 70226 g99576 i0 35.1 3.47808764940239 77 41 86.1 2 247 32 40 112 KAH7731482.1 GDP-fucose protein O-fucosyltransferase 2 precursor [Aphelenchoides avenae] diamond 873 60.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
32299297 32299297 PRJNA812715_P_NODE_66579_length_316_cov_1.267490_g64779_i0 PRJNA812715 66579 316 1.26749 4.0052684 Steinernema hermaphroditum 289476 Nematoda Nematoda 43.5 0.0486   NR KAK0404272.1 289476 g64779 i0 34 0.503164556962025 53 35 50.3 0 181 23 1026 1078 KAK0404272.1 hypothetical protein QR680_017376 [Steinernema hermaphroditum] diamond 159 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema hermaphroditum
32623728 32623728 PRJNA812715_P_NODE_102280_length_251_cov_0.865169_g100479_i0 PRJNA812715 102280 251 0.865169 2.17157419 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 90.1 3.33e-19   NR ABA53863.1 148309 g100479 i0 65 28.4940239043825 60 19 69.3 1 251 78 284 343 ABA53863.1 cathepsin B-like cysteine protease 1 [Parelaphostrongylus tenuis] diamond 7152 90.5 0.995580110497237 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
32803938 32803938 PRJNA812715_P_NODE_54940_length_358_cov_10.115789_g53141_i0 PRJNA812715 54940 358 10.115789 36.21452462 Caenorhabditis remanei 31234 Nematoda Nematoda 57.8 2.4e-8   NR EFO97152.1 31234 g53141 i0 65.5 0.921787709497207 55 19 46.1 0 192 356 16 70 EFO97152.1 hypothetical protein CRE_30201 [Caenorhabditis remanei] diamond 330 57.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
32875675 32875675 PRJNA812715_P_NODE_28940_length_569_cov_1.743952_g27183_i0 PRJNA812715 28940 569 1.743952 9.92308688 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 72.8 3.59e-11   NR EGT52892.1 135651 g27183 i0 51.4 2.36203866432337 74 36 39 0 564 343 701 774 EGT52892.1 hypothetical protein CAEBREN_07404 [Caenorhabditis brenneri] diamond 1344 73.2 0.994535519125683 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;