RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA812715", tax_phylum = "Ignavibacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA812715 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22488926 22488926 PRJNA812715_P_NODE_117618_length_243_cov_0.905882_g115817_i0 PRJNA812715 117618 243 0.905882 2.20129326 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 87 9.07e-18   NR RJP57422.1 2049428 g115817 i0 60.5 1 81 27 93.8 1 232 5 287 367 RJP57422.1 MAG: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [Ignavibacteriales bacterium] diamond 243 87 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28444048 28444048 PRJNA812715_P_NODE_101766_length_251_cov_0.865169_g99965_i0 PRJNA812715 101766 251 0.865169 2.17157419 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 73.2 6.06e-14   NR MCX6161320.1 2026749 g99965 i0 44.9 0.932270916334661 78 42 93.2 1 2 235 35 111 MCX6161320.1 hypothetical protein [Ignavibacteriota bacterium] diamond 234 73.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;