RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA812715" and tax_phylum = "Cercozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA812715 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14839804 14839804 PRJNA812715_P_NODE_100572_length_252_cov_1.720670_g98771_i0 PRJNA812715 100572 252 1.72067 4.3360884 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 392 1.1899999999999997e-104   NTclustered gi|238617605|gb|FJ973380.1| 45107 g98771 i0 94.841 59.9166666666667 252 12 100 1 1 252 2206 2456 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 15099 392 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
29170241 29170241 PRJNA812715_P_NODE_109789_length_247_cov_0.885057_g107988_i0 PRJNA812715 109789 247 0.885057 2.18609079 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.95e-4   NR MES1908073.1 1215613 g107988 i0 42.4 0.716599190283401 59 34 71.7 0 246 70 595 653 MES1908073.1 hypothetical protein [Cercozoa sp. M6MM] diamond 177 49.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
29548831 29548831 PRJNA812715_P_NODE_66930_length_315_cov_0.954545_g65130_i0 PRJNA812715 66930 315 0.954545 3.00681675 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 145 5.72e-40   NR MES1910251.1 1215613 g65130 i0 69.7 0.942857142857143 99 29 94.3 1 314 18 234 331 MES1910251.1 hypothetical protein [Cercozoa sp. M6MM] diamond 297 145 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30433850 30433850 PRJNA812715_P_NODE_77133_length_289_cov_1.425926_g75333_i0 PRJNA812715 77133 289 1.425926 4.12092614 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 70.1 6.44e-13   NR MES1913255.1 1215613 g75333 i0 46.4 0.716262975778547 69 34 68.5 1 87 284 34 102 MES1913255.1 hypothetical protein [Cercozoa sp. M6MM] diamond 207 70.1 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;