RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA812715" and tax_phylum = "Candidatus Binatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA812715 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9739980 9739980 PRJNA812715_P_NODE_109328_length_247_cov_0.885057_g107527_i0 PRJNA812715 109328 247 0.885057 2.18609079 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 95.3 3.66e-15   NTclustered gi|2814788387|emb|OY762897.2| 2838779 g107527 i0 96.491 0.882591093117409 57 2 23 0 48 104 909792 909848 MAG: Candidatus Binatia bacterium isolate 08c4157d-86a7-49cc-8b26-f3076a3ae996 genome assembly, chromosome: 1 blastn 218 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29391232 29391232 PRJNA812715_P_NODE_101389_length_251_cov_1.691011_g99588_i0 PRJNA812715 101389 251 1.691011 4.24443761 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 94 6.31e-22   NR HEX2931232.1 2838779 g99588 i0 79.7 0.764940239043825 64 13 76.5 0 192 1 2 65 HEX2931232.1 rod shape-determining protein MreD [Candidatus Binatia bacterium] diamond 192 94 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30275741 30275741 PRJNA812715_P_NODE_103212_length_250_cov_1.740113_g101411_i0 PRJNA812715 103212 250 1.740113 4.3502825 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 144 1.0499999999999999e-40   NR HLX38780.1 2785449 g101411 i0 78.3 0.996 83 18 99.6 0 249 1 111 193 HLX38780.1 CBS domain-containing protein [Candidatus Binataceae bacterium] diamond 249 144 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30907584 30907584 PRJNA812715_P_NODE_113474_length_245_cov_0.895349_g111673_i0 PRJNA812715 113474 245 0.895349 2.19360505 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 81.6 7.66e-16   NR MCX8072461.1 2838779 g111673 i0 57.4 1.66530612244898 68 27 83.3 1 1 204 359 424 MCX8072461.1 alpha-glucosidase [Candidatus Binatia bacterium] diamond 408 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;