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contig_metadata

23 rows where bioproject = "PRJNA812715" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA812715 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4640233 4640233 PRJNA812715_P_NODE_103284_length_250_cov_1.655367_g101483_i0 PRJNA812715 103284 250 1.655367 4.1384175 Halamphora coffeiformis 1487565 SAR_Eukaryotes SAR_Eukaryotes 106 1.71e-18   NTclustered gi|1418576889|ref|NC_037727.1| 1487565 g101483 i0 82.645 0.656 121 20 48 1 123 242 31722 31602 Halamphora coffeaeformis mitochondrion, complete genome blastn 164 106 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Amphipleuraceae Halamphora Halamphora coffeiformis
6329171 6329171 PRJNA812715_P_NODE_68565_length_310_cov_2.746835_g66765_i0 PRJNA812715 68565 310 2.746835 8.5151885 Bacteriastrum 426670 SAR_Eukaryotes SAR_Eukaryotes 82.4 3.69e-11   NTclustered gi|572099130|gb|KC914886.1| 426671 g66765 i0 86.486 16.0774193548387 74 10 24 0 231 304 544 617 Bacteriastrum hyalinum strain PMF BA2 28S ribosomal RNA gene, partial sequence blastn 4984 82.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Bacteriastrum Bacteriastrum hyalinum
8465963 8465963 PRJNA812715_P_NODE_32307_length_523_cov_4.322222_g30534_i0 PRJNA812715 32307 523 4.322222 22.60522106 Thalassiosira pseudonana 35128 SAR_Eukaryotes SAR_Eukaryotes 331 5.8800000000000004e-86   NTclustered gi|224004207|ref|XM_002295719.1| 296543 g30534 i0 80.044 72.2676864244742 451 86 86 4 4 452 31 479 Thalassiosira pseudonana CCMP1335 calmodulin (CAM1), mRNA blastn 37796 331 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
17391971 17391971 PRJNA812715_P_NODE_51194_length_376_cov_2.541254_g49396_i0 PRJNA812715 51194 376 2.541254 9.55511504 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 94 1.65e-19   NR GFH58195.1 426638 g49396 i0 43.3 4.31648936170213 120 56 95.7 3 360 1 1 108 GFH58195.1 glutathione reductase [Chaetoceros tenuissimus] diamond 1623 94 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
18665273 18665273 PRJNA812715_P_NODE_58255_length_345_cov_1.698529_g56456_i0 PRJNA812715 58255 345 1.698529 5.85992505 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 171 2.2299999999999994e-52   NR KAK1732323.1 267567 g56456 i0 77.5 1.77391304347826 102 23 88.7 0 11 316 7 108 KAK1732323.1 peptidyl-prolyl cis-trans isomerase, FKBP type [Skeletonema marinoi] diamond 612 171 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
22490642 22490642 PRJNA812715_P_NODE_58578_length_344_cov_1.398524_g56779_i0 PRJNA812715 58578 344 1.398524 4.81092256 Sellaphora cf. seminulum 433382 SAR_Eukaryotes SAR_Eukaryotes 577 4.3399999999999997e-160   NTclustered gi|134143237|gb|EF151967.1| 433382 g56779 i0 96.821 100.354651162791 346 9 100 2 1 344 1091 746 Sellaphora cf. seminulum clone TM37 18S ribosomal RNA gene, partial sequence blastn 34522 577 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Sellaphoraceae Sellaphora Sellaphora cf. seminulum
23766643 23766643 PRJNA812715_P_NODE_69039_length_309_cov_2.542373_g67239_i0 PRJNA812715 69039 309 2.542373 7.85593257 Nitzschia sp. (in: diatoms) 1884248 SAR_Eukaryotes SAR_Eukaryotes 507 5.12e-139   NTclustered gi|2862228875|gb|PQ645509.1| 1884248 g67239 i0 96.417 99.1877022653722 307 11 99 0 3 309 3750 4056 Nitzschia sp. (in: diatoms) isolate AGSB0363 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30649 507 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia sp. (in: diatoms)
27686497 27686497 PRJNA812715_P_NODE_37884_length_465_cov_1.173469_g36095_i0 PRJNA812715 37884 465 1.173469 5.45663085 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 100 3.46e-21   NR KAK1736876.1 267567 g36095 i0 39.7 0.87741935483871 136 82 87.7 0 455 48 440 575 KAK1736876.1 ABC1 kinase family protein [Skeletonema marinoi] diamond 408 100 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
28222701 28222701 PRJNA812715_P_NODE_102226_length_251_cov_0.865169_g100425_i0 PRJNA812715 102226 251 0.865169 2.17157419 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 102 3.5399999999999995e-23   NR CAB9504475.1 568900 g100425 i0 56.1 0.9800796812749 82 36 98 0 3 248 311 392 CAB9504475.1 expressed unknown protein [Seminavis robusta] diamond 246 102 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
28349172 28349172 PRJNA812715_P_NODE_71326_length_303_cov_1.004348_g69526_i0 PRJNA812715 71326 303 1.004348 3.04317444 Bacillariaceae sp. 3061772 SAR_Eukaryotes SAR_Eukaryotes 63.5 5.65e-10   NR KAL3929318.1 3061772 g69526 i0 40 1.78217821782178 90 51 87.1 2 31 294 30 118 KAL3929318.1 MAG: hypothetical protein SGBAC_012265 [Bacillariaceae sp.] diamond 540 63.5 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae   Bacillariaceae sp.
28642284 28642284 PRJNA812715_P_NODE_116107_length_244_cov_0.900585_g114306_i0 PRJNA812715 116107 244 0.900585 2.1974274 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 87.4 6.27e-18   NR KAL3769940.1 382360 g114306 i0 71.2 3.83606557377049 52 15 63.9 0 242 87 445 496 KAL3769940.1 hypothetical protein ACHAWO_001888 [Cyclotella atomus] diamond 936 87.4 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella atomus
29485602 29485602 PRJNA812715_P_NODE_21970_length_707_cov_2.791798_g20303_i0 PRJNA812715 21970 707 2.791798 19.73801186 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 257 1.36e-81   NR XP_002183747.1 556484 g20303 i0 62.7 4.93493635077794 193 72 81.9 0 707 129 130 322 XP_002183747.1 3-hydroxyacyl-coenzyme A dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1] diamond 3489 257 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
30307608 30307608 PRJNA812715_P_NODE_70112_length_306_cov_1.652361_g68312_i0 PRJNA812715 70112 306 1.652361 5.05622466 Mayamaea pseudoterrestris 2872254 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.0092   NR GKZ00765.1 2872254 g68312 i0 33.3 0.588235294117647 60 38 56.9 1 288 115 711 770 GKZ00765.1 hypothetical protein MPSEU_001028300 [Mayamaea pseudoterrestris] diamond 180 45.4 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea pseudoterrestris
30559631 30559631 PRJNA812715_P_NODE_85753_length_275_cov_1.524752_g83952_i0 PRJNA812715 85753 275 1.524752 4.193068 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 105 2.6599999999999998e-24   NR CAB9504475.1 568900 g83952 i0 72.7 0.72 66 17 70.9 1 274 80 397 462 CAB9504475.1 expressed unknown protein [Seminavis robusta] diamond 198 105 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
30780984 30780984 PRJNA812715_P_NODE_115954_length_244_cov_0.900585_g114153_i0 PRJNA812715 115954 244 0.900585 2.1974274 Fistulifera solaris 1519565 SAR_Eukaryotes SAR_Eukaryotes 62.4 4.36e-9   NR GAX21897.1 1519565 g114153 i0 45.6 1.70901639344262 68 35 83.6 1 227 24 589 654 GAX21897.1 hypothetical protein FisN_30Hh099 [Fistulifera solaris] diamond 417 62.4 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Fistulifera Fistulifera solaris
30852941 30852941 PRJNA812715_P_NODE_90074_length_268_cov_2.328205_g88273_i0 PRJNA812715 90074 268 2.328205 6.2395894 Nitzschia 2857 SAR_Eukaryotes SAR_Eukaryotes 179 3.81e-50   NR KAG7340507.1 303405 g88273 i0 94.4 10.9589552238806 89 5 99.6 0 2 268 205 293 KAG7340507.1 serine/threonine protein kinase [Nitzschia inconspicua] diamond 2937 179 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
31223172 31223172 PRJNA812715_P_NODE_41135_length_438_cov_1.463014_g39340_i0 PRJNA812715 41135 438 1.463014 6.40800132 Thalassiosira pseudonana CCMP1335 296543 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0355   NR XP_002287141.1 296543 g39340 i0 52.8 0.246575342465753 36 17 24.7 0 433 326 31 66 XP_002287141.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335] diamond 108 42.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
31295350 31295350 PRJNA812715_P_NODE_23495_length_670_cov_2.422111_g21806_i0 PRJNA812715 23495 670 2.422111 16.2281437 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 132 2.08e-31   NR KAL3801955.1 29204 g21806 i0 31.3 3.99850746268657 227 151 99.4 1 2 667 435 661 KAL3801955.1 hypothetical protein HJC23_010299, partial [Cyclotella cryptica] diamond 2679 132 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
31476587 31476587 PRJNA812715_P_NODE_70076_length_306_cov_1.961373_g68276_i0 PRJNA812715 70076 306 1.961373 6.00180138 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 74.3 6.38e-13   NR KAK1735659.1 267567 g68276 i0 37 0.794117647058823 81 49 79.4 1 304 62 1148 1226 KAK1735659.1 glycosyltransferase (family 90) [Skeletonema marinoi] diamond 243 74.3 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
31697825 31697825 PRJNA812715_P_NODE_74757_length_294_cov_1.040724_g72957_i0 PRJNA812715 74757 294 1.040724 3.05972856 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 116 1.0600000000000002e-27   NR CAB9509032.1 568900 g72957 i0 58.2 1 98 40 100 1 1 294 565 661 CAB9509032.1 Alanine--tRNA ligase [Seminavis robusta] diamond 294 116 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta
32172552 32172552 PRJNA812715_P_NODE_101398_length_251_cov_1.674157_g99597_i0 PRJNA812715 101398 251 1.674157 4.20213407 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 121 7.359999999999999e-31   NR KAG7361563.1 303405 g99597 i0 70 1.80478087649402 70 21 83.7 0 212 3 44 113 KAG7361563.1 peptidase C1A, papain family protein [Nitzschia inconspicua] diamond 453 121 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
32866926 32866926 PRJNA812715_P_NODE_37380_length_469_cov_1.555556_g35591_i0 PRJNA812715 37380 469 1.555556 7.29555764 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 179 5.74e-51   NR XP_002185619.1 556484 g35591 i0 59.9 5.05970149253731 157 62 99.8 1 2 469 122 278 XP_002185619.1 beta-ketoacyl-CoA thiolase [Phaeodactylum tricornutum CCAP 1055/1] diamond 2373 179 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
32866953 32866953 PRJNA812715_P_NODE_98900_length_255_cov_1.269231_g97099_i0 PRJNA812715 98900 255 1.269231 3.23653905 Cyclotella atomus 382360 SAR_Eukaryotes SAR_Eukaryotes 102 3.2000000000000003e-23   NR KAL3797462.1 382360 g97099 i0 56.6 0.976470588235294 83 36 97.6 0 251 3 850 932 KAL3797462.1 hypothetical protein ACHAWO_012287 [Cyclotella atomus] diamond 249 102 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella atomus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;